RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 SPOCD1Q6ZMY3 1216 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 ANKS1BQ7Z6G8 1248 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 CIR1Q86X95 450 aaPredicted RBP12.29□□□□□ -0.44
COMMD9-208ENST00000533643 MAP7D3Q8IWC1 876 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 HJURPQ8NCD3 748 aaPredicted RBP12.29□□□□□ -0.44
COMMD9-208ENST00000533643 RNF25Q96BH1 459 aaPredicted RBP12.29□□□□□ -0.44
COMMD9-208ENST00000533643 TBC1D31Q96DN5 1066 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 CSPG4P5Q96PW8 444 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 CALN1Q9BXU9 219 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 BRD9Q9H8M2 597 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 MPP6Q9NZW5 540 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 MARK1Q9P0L2 795 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 RCOR3Q9P2K3 495 aaPredicted RBP12.29□□□□□ -0.44
COMMD9-208ENST00000533643 PPARGC1AQ9UBK2 798 aaKnown RBP12.29□□□□□ -0.44
COMMD9-208ENST00000533643 KIF26AQ9ULI4 1882 aaPredicted RBP12.28□□□□□ -0.44
COMMD9-208ENST00000533643 ZNF487B1APH4 448 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 KCNK3O14649 394 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 TBL1XO60907 577 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 PENKP01210 267 aaPredicted RBP12.28□□□□□ -0.44
COMMD9-208ENST00000533643 EPHB2P29323 1055 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 ARL4AP40617 200 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 CDKN2BP42772 138 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 TPI1P60174 286 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 ZNF211Q13398 564 aaPredicted RBP12.28□□□□□ -0.44
COMMD9-208ENST00000533643 TDGQ13569 410 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 RUNX3Q13761 415 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 GAB4Q2WGN9 574 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 ALFQ53S48 1182 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 ANKRD20A8PQ5CZ79 823 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 RNF43Q68DV7 783 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 RWDD4Q6NW29 188 aaKnown RBP12.28□□□□□ -0.44
COMMD9-208ENST00000533643 RFX8Q6ZV50 586 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 NLRP14Q86W24 1093 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 CPA6Q8N4T0 437 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 DDI1Q8WTU0 396 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 BHMTQ93088 406 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 FAF2Q96CS3 445 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
COMMD9-208ENST00000533643 C16orf45Q96MC5 204 aaPredicted RBP12.28□□□□□ -0.44
COMMD9-208ENST00000533643 ZNF670Q9BS34 389 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 ZYG11BQ9C0D3 744 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 ECT2Q9H8V3 914 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 ARHGEF4Q9NR80 690 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 PLK2Q9NYY3 685 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 STIM2Q9P246 746 aa12.28□□□□□ -0.44
COMMD9-208ENST00000533643 NEDD8-MDP1E9PL57 170 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 HOXC11O43248 304 aaPredicted RBP12.27□□□□□ -0.45
COMMD9-208ENST00000533643 DAPK3O43293 454 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 NARSO43776 548 aaKnown RBP12.27□□□□□ -0.45
COMMD9-208ENST00000533643 ADH1CP00326 375 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 CYBBP04839 570 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 ADH5P11766 374 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 RHOQP17081 205 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 AMPD1P23109 780 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 HOXD9P28356 352 aaPredicted RBP12.27□□□□□ -0.45
COMMD9-208ENST00000533643 CDH4P55283 916 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 COPS2P61201 443 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 NR1H3Q13133 447 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 LLGL1Q15334 1064 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 ANO4Q32M45 955 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 ITPRIPL2Q3MIP1 535 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 ODF2Q5BJF6 829 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 MPP7Q5T2T1 576 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 TTC39BQ5VTQ0 682 aaPredicted RBP12.27□□□□□ -0.45
COMMD9-208ENST00000533643 AADACL2Q6P093 401 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 SYT10Q6XYQ8 523 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 CHST9Q7L1S5 443 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 TFAP2DQ7Z6R9 452 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 VSIG1Q86XK7 387 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 PQLC3Q8N755 202 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 PCDH19Q8TAB3 1148 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 RNF157Q96PX1 679 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 PSMB7Q99436 277 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 NAPGQ99747 312 aaPredicted RBP12.27□□□□□ -0.45
COMMD9-208ENST00000533643 BBS2Q9BXC9 721 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 TRPV5Q9NQA5 729 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 ETNK2Q9NVF9 386 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 GTSE1Q9NYZ3 720 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 ZNF212Q9UDV6 495 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 DNAI1Q9UI46 699 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 CLEC4EQ9ULY5 219 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 MFHAS1Q9Y4C4 1052 aa12.27□□□□□ -0.45
COMMD9-208ENST00000533643 hCG_1818297A0A087WSY0 165 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 A0A1B0GVM2 712 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 CTAGE9A4FU28 777 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 TCAF2A6NFQ2 919 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 WASH4PA8MWX3 477 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 DCLK1O15075 740 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 FGF10O15520 208 aaPredicted RBP12.26□□□□□ -0.45
COMMD9-208ENST00000533643 CLDN11O75508 207 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 KRT10P13645 584 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 TYRP14679 529 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 ERCC2P18074 760 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 CXCR5P32302 372 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 PTPN7P35236 360 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 GAD2Q05329 585 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 PPP2R5EQ16537 467 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 PAPD7Q5XG87 772 aaKnown RBP12.26□□□□□ -0.45
COMMD9-208ENST00000533643 RNF135Q8IUD6 432 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms