RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CNOT8Q9UFF9 292 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-212ENST00000533058 STAP1Q9ULZ2 295 aa13.41□□□□□ -0.26
TRAPPC4-212ENST00000533058 PCDHGA5Q9Y5G8 931 aa13.41□□□□□ -0.26
TRAPPC4-212ENST00000533058 A0A1W2PQF6 199 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 SOWAHDA6NJG2 315 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 PRR5-ARHGAP8B1AHC4 643 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 NRDCO43847 1150 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 RHOBTB1O94844 696 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 EPN2O95208 641 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 TRUB2O95900 331 aaKnown RBP13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 H2AFZP0C0S5 128 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 SLC2A3P11169 496 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 HOXB2P14652 356 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 PDGFRAP16234 1089 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 NOS2P35228 1153 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 P2RY2P41231 377 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 MATKP42679 507 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 GALCP54803 685 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 ARHGAP8P85298 464 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 MTA1Q13330 715 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 CSRP2Q16527 193 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 LPAL2Q16609 132 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 GEN1Q17RS7 908 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 SPDYCQ5MJ68 293 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 H2AFVQ71UI9 128 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 SND1Q7KZF4 910 aaKnown RBP eCLIP13.4□□□□□ -0.263e-8■■□□□ 12.3
TRAPPC4-212ENST00000533058 TAC4Q86UU9 113 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 KBTBD6Q86V97 674 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 KIAA2013Q8IYS2 634 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 CCDC170Q8IYT3 715 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 EMC1Q8N766 993 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 WFIKKN2Q8TEU8 576 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 MCEEQ96PE7 176 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 THAP2Q9H0W7 228 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 DUSP15Q9H1R2 295 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 LUC7LQ9NQ29 371 aaKnown RBP13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 DDIT4Q9NX09 232 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 ELOVL2Q9NXB9 296 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 RRN3Q9NYV6 651 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 CLEC4EQ9ULY5 219 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 SCINQ9Y6U3 715 aa13.4□□□□□ -0.26
TRAPPC4-212ENST00000533058 SIGLEC16A6NMB1 481 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 M0QYT0 321 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 C7P10643 843 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 GPD1P21695 349 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 SDHBP21912 280 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 HLA-FP30511 346 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 SDC4P31431 198 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 FLT3P36888 993 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 GSCP56915 257 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 ATP11AP98196 1134 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 LMNB2Q03252 620 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 ELF2Q15723 593 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 ASTE1Q2TB18 679 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 NADSYN1Q6IA69 706 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 METTL3Q86U44 580 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 JOSD2Q8TAC2 188 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 RXFP2Q8WXD0 754 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 BTN2A3PQ96KV6 586 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 CFAP57Q96MR6 1250 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 ACOX2Q99424 681 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 TPSD1Q9BZJ3 242 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 MRPL47Q9HD33 250 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 PARD6AQ9NPB6 346 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 ZDHHC4Q9NPG8 344 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 SEMA4GQ9NTN9 838 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 TMEM59LQ9UK28 342 aa13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 MYO18AQ92614 2054 aaKnown RBP13.39□□□□□ -0.27
TRAPPC4-212ENST00000533058 FRYLO94915 3013 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 TCRBV21S2A2A0A5A6 115 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 KCNU1A8MYU2 1149 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 ZBTB24O43167 697 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 TSPAN3O60637 253 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 MOCS2O96007 188 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 APOEP02649 317 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 GABRG2P18507 467 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 SLC6A4P31645 630 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 RFC1P35251 1148 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 PITX1P78337 314 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 DEUP1Q05D60 604 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 MAMLD1Q13495 774 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 CDO1Q16878 200 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 MAP7D1Q3KQU3 841 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 SLC25A52Q3SY17 297 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 MS4A13Q5J8X5 152 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 PMS2CLQ68D20 193 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 TMEM215Q68D42 235 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 PLEKHA7Q6IQ23 1121 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 ARCQ7LC44 396 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 HJURPQ8NCD3 748 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 FIBINQ8TAL6 211 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 NT5C3BQ969T7 300 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 TBCBQ99426 244 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 NUP85Q9BW27 656 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 PACSIN1Q9BY11 444 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 DLL3Q9NYJ7 618 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 CTTNBP2NLQ9P2B4 639 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 SLC12A6Q9UHW9 1150 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms