RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 C12orf40Q86WS4 652 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 MFN1Q8IWA4 741 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 ZNF683Q8IZ20 524 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 CCAR2Q8N163 923 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 PYROXD2Q8N2H3 581 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 FLCNQ8NFG4 579 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 TPCN2Q8NHX9 752 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 FIBINQ8TAL6 211 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 KIAA1524Q8TCG1 905 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 TEKT4Q8WW24 435 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 HSPH1Q92598 858 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 CHFRQ96EP1 664 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 PEBP4Q96S96 227 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 SNRNP25Q9BV90 132 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 MAGEB5Q9BZ81 275 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 ZYG11BQ9C0D3 744 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 KCNF1Q9H3M0 494 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 EPHX3Q9H6B9 360 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 RETREG1Q9H6L5 497 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 TBC1D17Q9HA65 648 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 ARHGEF4Q9NR80 690 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 KIAA1522Q9P206 1035 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 PPARGC1AQ9UBK2 798 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 NDRG2Q9UN36 371 aaKnown RBP11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 PPP2R2CQ9Y2T4 447 aa11.59□□□□□ -0.55
TRAPPC4-211ENST00000533012 MYO10Q9HD67 2058 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 A0A0A0MRY4 1105 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 A0A0U1RQJ8 604 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 A0A1B0GVM2 712 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 TBC1D3BA6NDS4 549 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 TCAF2A6NFQ2 919 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 SHISA7A6NL88 538 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 FAM72CH0Y354 149 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 DAPK3O43293 454 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 ZNF500O60304 480 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 LRIG2O94898 1065 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 KAT7O95251 611 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 CISD3P0C7P0 127 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 TCF4P15884 667 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 EPHB2P29323 1055 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 HTR7P34969 479 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 ZNF135P52742 658 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 OXCT1P55809 520 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 TAS2R40P59535 323 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 UBXN2BQ14CS0 331 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 CA9Q16790 459 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 SMTNL2Q2TAL5 461 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 PPP6R3Q5H9R7 873 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 TMEM196Q5HYL7 178 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 FAM72AQ5TYM5 149 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 FAM72DQ6L9T8 149 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 C11orf63Q6NUN7 778 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 CYP4V2Q6ZWL3 525 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 FAM72BQ86X60 149 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 MAP7D3Q8IWC1 876 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 RHOT1Q8IXI2 618 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 SYCE1Q8N0S2 351 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 KCTD6Q8NC69 237 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 CCDC26Q8TAB7 109 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 ATRIPQ8WXE1 791 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 PBXIP1Q96AQ6 731 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 TBC1D31Q96DN5 1066 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 P2RY11Q96G91 374 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 OSBPL6Q9BZF3 934 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 CATSPERBQ9H7T0 1116 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 FBRSL1Q9HCM7 1045 aaKnown RBP11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 LTB4R2Q9NPC1 389 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 GPATCH2LQ9NWQ4 482 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 DONSONQ9NYP3 566 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 MPP6Q9NZW5 540 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 TRIM10Q9UDY6 481 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 CLEC4EQ9ULY5 219 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 GUCA1BQ9UMX6 200 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 SLC27A6Q9Y2P4 619 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 SIT1Q9Y3P8 196 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 HYOU1Q9Y4L1 999 aa11.58□□□□□ -0.56
TRAPPC4-211ENST00000533012 H3BRJ5 948 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 EEF2KO00418 725 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 TRIM24O15164 1050 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 ZSCAN12O43309 604 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 TIMM44O43615 452 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 CNTN5O94779 1100 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 MOCS3O95396 460 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 TNNT1P13805 278 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 RHOQP17081 205 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 TARSP26639 723 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 OR1E1P30953 314 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 GJC1P36383 396 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 ARL4AP40617 200 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 TNFRSF4P43489 277 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 HCAR3P49019 387 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 CLCN5P51795 746 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 TPI1P60174 286 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 KDSRQ06136 332 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 LRRC32Q14392 662 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 KRT81Q14533 505 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 DPYSL2Q16555 572 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 FBXO43Q4G163 708 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 ALFQ53S48 1182 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms