RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 C2orf49Q9BVC5 232 aaPredicted RBP15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 PADI4Q9UM07 663 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 HACD1B0YJ81 288 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 PIK3CDO00329 1044 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 PYGMP11217 842 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 EIF4BP23588 611 aaKnown RBP15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 CLK1P49759 484 aaKnown RBP15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 SLC45A4Q5BKX6 768 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 NPNTQ6UXI9 565 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 B3GALNT2Q8NCR0 500 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 MTMR8Q96EF0 704 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 ASTN1O14525 1302 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 SF3B1O75533 1304 aaKnown RBP eCLIP15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 PPP1R11O60927 126 aaPredicted RBP15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 TNNI3P19429 210 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 CCNG1P51959 295 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 SEC24CP53992 1094 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 DAB2IPQ5VWQ8 1189 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 TATDN1Q6P1N9 297 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 RBM43Q6ZSC3 357 aaKnown RBP15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 IKZF4Q9H2S9 585 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 SERPINA4P29622 427 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 ATP5C1P36542 298 aaKnown RBP15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 REPS1Q96D71 796 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 KRT84Q9NSB2 600 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 TAS2R13Q9NYV9 303 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 SAE1Q9UBE0 346 aaPredicted RBP15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 TDRKHQ9Y2W6 561 aaKnown RBP15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 DAB1O75553 588 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 CPA3P15088 417 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 CYLC2Q14093 348 aaPredicted RBP15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 KCTD19Q17RG1 926 aaPredicted RBP15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 NOMO2Q5JPE7 1267 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 ZCCHC8Q6NZY4 707 aaKnown RBP15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 HTR3CQ8WXA8 447 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 STK39Q9UEW8 545 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 MPOP05164 745 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 HLA-DQA1Q5Y7H0 255 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 FAM183BPQ6ZVS7 135 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 KIF2BQ8N4N8 673 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 ZDHHC6Q9H6R6 413 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 CYP3A7-CYP3A51PA0A087WV96 503 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 A0A088AWK7 358 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 ZNF10P21506 573 aaPredicted RBP15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 CYP3A7P24462 503 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 SERPINB5P36952 375 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 THOP1P52888 689 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 ITGB3BPQ13352 177 aaPredicted RBP15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 PGS1Q32NB8 556 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 ARMC12Q5T9G4 340 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 NYAP1Q6ZVC0 841 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 SERAC1Q96JX3 654 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 PARVBQ9HBI1 364 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 MARCH2Q9P0N8 246 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 KCNK1O00180 336 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 DDX3XO00571 662 aaKnown RBP eCLIP15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 STAU1O95793 577 aaKnown RBP15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 MGAT1P26572 445 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 PPM1AP35813 382 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 MAPK8P45983 427 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 CDT1Q9H211 546 aa15.09■□□□□ 0.01
PCDHA9-202ENST00000532602 MOXD2PA6NHM9 499 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 MMP3P08254 477 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 PEX5P50542 639 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 RAP1GAP2Q684P5 730 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 MICU2Q8IYU8 434 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 CENPLQ8N0S6 344 aaPredicted RBP15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 TMEM161BQ8NDZ6 487 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 FAM153AQ9UHL3 310 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 F8VP50 259 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 MIPP30301 263 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 PIK3CGP48736 1102 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 PSEN1P49768 467 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 NFYCQ13952 458 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 FBXL19Q6PCT2 694 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 AVENQ9NQS1 362 aaPredicted RBP15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 ZNF229Q9UJW7 825 aa15.08■□□□□ 0.01
PCDHA9-202ENST00000532602 PRR23D1E9PI22 279 aaPredicted RBP15.08■□□□□ 0
PCDHA9-202ENST00000532602 M0R3G1 203 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 PRR23D2P0DMB1 279 aaPredicted RBP15.08■□□□□ 0
PCDHA9-202ENST00000532602 GTF2E2P29084 291 aaKnown RBP15.08■□□□□ 0
PCDHA9-202ENST00000532602 HNRNPLLQ8WVV9 542 aaKnown RBP15.08■□□□□ 0
PCDHA9-202ENST00000532602 USP6NLQ92738 828 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 MYLPFQ96A32 169 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 AHCYL2Q96HN2 611 aaKnown RBP15.08■□□□□ 0
PCDHA9-202ENST00000532602 FUCA2Q9BTY2 467 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 OSBPL10Q9BXB5 764 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 CDC42EP4Q9H3Q1 356 aaKnown RBP15.08■□□□□ 0
PCDHA9-202ENST00000532602 PTPRHQ9HD43 1115 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 COPG1Q9Y678 874 aaKnown RBP15.08■□□□□ 0
PCDHA9-202ENST00000532602 ERI2A8K979 691 aaKnown RBP15.08■□□□□ 0
PCDHA9-202ENST00000532602 FARP2O94887 1054 aaPredicted RBP15.08■□□□□ 0
PCDHA9-202ENST00000532602 LRRC8DQ7L1W4 858 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 DENND1CQ8IV53 801 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 FIBCD1Q8N539 461 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 C12orf29Q8N999 325 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 MAGEC3Q8TD91 643 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 SYBUQ9NX95 663 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 TBC1D3BA6NDS4 549 aa15.08■□□□□ 0
PCDHA9-202ENST00000532602 NDUFB5O43674 189 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms