RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 VIPR2P41587 438 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 TAS2R40P59535 323 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 SEMA3BQ13214 749 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 PDK2Q15119 407 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 RAB6CQ53S08 254 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 FAM133BQ5BKY9 247 aaKnown RBP12.93□□□□□ -0.34
COPB1-208ENST00000532088 MS4A13Q5J8X5 152 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 MPP7Q5T2T1 576 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 TTC39BQ5VTQ0 682 aaPredicted RBP12.93□□□□□ -0.34
COPB1-208ENST00000532088 ZSCAN30Q86W11 494 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 DENND1CQ8IV53 801 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 YAF2Q8IY57 180 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 SNIP1Q8TAD8 396 aaKnown RBP12.93□□□□□ -0.34
COPB1-208ENST00000532088 RIN3Q8TB24 985 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 FGF14Q92915 247 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 RSPRY1Q96DX4 576 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 HES6Q96HZ4 224 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 RPGRIP1Q96KN7 1286 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 PRMT1Q99873 361 aaKnown RBP12.93□□□□□ -0.34
COPB1-208ENST00000532088 SNRNP25Q9BV90 132 aaKnown RBP12.93□□□□□ -0.34
COPB1-208ENST00000532088 RAB6CQ9H0N0 254 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 PRDM16Q9HAZ2 1276 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 TRPV5Q9NQA5 729 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 TOR4AQ9NXH8 423 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 PPARGC1AQ9UBK2 798 aaKnown RBP12.93□□□□□ -0.34
COPB1-208ENST00000532088 PCSK1NQ9UHG2 260 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 CDV3Q9UKY7 258 aaKnown RBP12.93□□□□□ -0.34
COPB1-208ENST00000532088 JRKLQ9Y4A0 524 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 PCDHA3Q9Y5H8 950 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 HS3ST4Q9Y661 456 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 NUMBLQ9Y6R0 609 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 IGLV3-10A0A075B6K4 115 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 I6L893 689 aaPredicted RBP12.92□□□□□ -0.34
COPB1-208ENST00000532088 MOCS2O96007 188 aaPredicted RBP12.92□□□□□ -0.34
COPB1-208ENST00000532088 RARAP10276 462 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 DEKP35659 375 aaKnown RBP12.92□□□□□ -0.34
COPB1-208ENST00000532088 IFNAR2P48551 515 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 HCAR3P49019 387 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 ARSEP51690 589 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 ZP2Q05996 745 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 MEI1Q5TIA1 1274 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 PIK3R6Q5UE93 754 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 MANEALQ5VSG8 457 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 NADSYN1Q6IA69 706 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 LRRC31Q6UY01 552 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 MAP7D3Q8IWC1 876 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 BBS7Q8IWZ6 715 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 KATNAL2Q8IYT4 538 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 UBL4BQ8N7F7 174 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 ZNF557Q8N988 423 aaPredicted RBP12.92□□□□□ -0.34
COPB1-208ENST00000532088 ATP2A3Q93084 1043 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 WBP2Q969T9 261 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 LRRC3BQ96PB8 259 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 ASB2Q96Q27 587 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 FAM83CQ9BQN1 747 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 TRMT61BQ9BVS5 477 aaKnown RBP12.92□□□□□ -0.34
COPB1-208ENST00000532088 ALG2Q9H553 416 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 KCNK12Q9HB15 430 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 ANLNQ9NQW6 1124 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 DUS2Q9NX74 493 aaKnown RBP12.92□□□□□ -0.34
COPB1-208ENST00000532088 DONSONQ9NYP3 566 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 MARK1Q9P0L2 795 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 OR12D3Q9UGF7 316 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 PCDHB9Q9Y5E1 797 aa12.92□□□□□ -0.34
COPB1-208ENST00000532088 DRGXA6NNA5 263 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 F5H5T6 163 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 NFATC1O95644 943 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 TCF4P15884 667 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 TACR2P21452 398 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 SSR1P43307 286 aaKnown RBP12.91□□□□□ -0.34
COPB1-208ENST00000532088 PEX5P50542 639 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 RWDD2BP57060 319 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 AUHQ13825 339 aaKnown RBP12.91□□□□□ -0.34
COPB1-208ENST00000532088 EML3Q32P44 896 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 RABGAP1LQ5R372 815 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 DAB2IPQ5VWQ8 1189 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 RNF43Q68DV7 783 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 CHSY1Q86X52 802 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 ZNF683Q8IZ20 524 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 ADGRG2Q8IZP9 1017 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 EXD1Q8NHP7 514 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 RBM41Q96IZ5 413 aaKnown RBP12.91□□□□□ -0.34
COPB1-208ENST00000532088 ZNF670Q9BS34 389 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 GOLPH3Q9H4A6 298 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 DHX35Q9H5Z1 703 aaKnown RBP12.91□□□□□ -0.34
COPB1-208ENST00000532088 ZWILCHQ9H900 591 aa12.91□□□□□ -0.34
COPB1-208ENST00000532088 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.91□□□□□ -0.34
COPB1-208ENST00000532088 XPO7Q9UIA9 1087 aaKnown RBP12.91□□□□□ -0.34
COPB1-208ENST00000532088 TYW5A2RUC4 315 aaKnown RBP12.9□□□□□ -0.34
COPB1-208ENST00000532088 WASH4PA8MWX3 477 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 E9PAM4 449 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 H3BRJ5 948 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 KIF2AO00139 706 aaPredicted RBP12.9□□□□□ -0.34
COPB1-208ENST00000532088 ARNTLO00327 626 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 FGF10O15520 208 aaPredicted RBP12.9□□□□□ -0.34
COPB1-208ENST00000532088 DDX3YO15523 660 aaKnown RBP12.9□□□□□ -0.34
COPB1-208ENST00000532088 HOXC11O43248 304 aaPredicted RBP12.9□□□□□ -0.34
COPB1-208ENST00000532088 FTCDO95954 541 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 ADH1CP00326 375 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 PENKP01210 267 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms