RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 ADCY6O43306 1168 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 USP1O94782 785 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 ERVK-10P10266 1014 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 GLUD2P49448 558 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 IDH3AP50213 366 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 PITX1P78337 314 aaPredicted RBP19.76■□□□□ 0.75
VPS28-213ENST00000530983 HIC1Q14526 733 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 GRIK4Q16099 956 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 SLC25A52Q3SY17 297 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 ZNF618Q5T7W0 954 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 OTUD1Q5VV17 481 aaPredicted RBP19.76■□□□□ 0.75
VPS28-213ENST00000530983 SLC27A1Q6PCB7 646 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 CES3Q6UWW8 571 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 IZUMO2Q6UXV1 221 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 ZNF410Q86VK4 478 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 RASSF3Q86WH2 238 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 DEFB106AQ8N104 65 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 SLC2A14Q8TDB8 520 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 PGLYRP2Q96PD5 576 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 GINS2Q9Y248 185 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 DICER1Q9UPY3 1922 aaKnown RBP19.76■□□□□ 0.75
VPS28-213ENST00000530983 KLHL2O95198 593 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 GRK2P25098 689 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 MLH1P40692 756 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 SULT1E1P49888 294 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 INSCQ1MX18 579 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 ZNF567Q8N184 647 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 RNF139Q8WU17 664 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 PGBD4Q96DM1 585 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 NAT9Q9BTE0 207 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 ZNF358Q9NW07 568 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 DNAJC28Q9NX36 388 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 SEPT10Q9P0V9 454 aa19.76■□□□□ 0.75
VPS28-213ENST00000530983 SPTLC1O15269 473 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 STK10O94804 968 aaKnown RBP19.75■□□□□ 0.75
VPS28-213ENST00000530983 ALOX15P16050 662 aaPredicted RBP19.75■□□□□ 0.75
VPS28-213ENST00000530983 GNL1P36915 607 aaPredicted RBP19.75■□□□□ 0.75
VPS28-213ENST00000530983 ADCYAP1R1P41586 468 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 ACADSBP45954 432 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 TMEM62Q0P6H9 643 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 RALGPS1Q5JS13 557 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 ALKAL1Q6UXT8 129 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 RSPH3Q86UC2 560 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 SULF1Q8IWU6 871 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 PPP4R1Q8TF05 950 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 DCPSQ96C86 337 aaKnown RBP19.75■□□□□ 0.75
VPS28-213ENST00000530983 HSFY1Q96LI6 401 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 MAGEA13PA6NCF6 341 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 BAG2O95816 211 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 CRABP2P29373 138 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 TKTP29401 623 aaKnown RBP19.75■□□□□ 0.75
VPS28-213ENST00000530983 TYK2P29597 1187 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 COPAP53621 1224 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 CACNA2D1P54289 1103 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 DSG1Q02413 1049 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 OLIG2Q13516 323 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 GSTA3Q16772 222 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 EFHC1Q5JVL4 640 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 FBXO47Q5MNV8 452 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 VWA5B1Q5TIE3 1220 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 CMC1Q7Z7K0 106 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 TP53INP2Q8IXH6 220 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 CCNYQ8ND76 341 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 EMID1Q96A84 441 aaPredicted RBP19.75■□□□□ 0.75
VPS28-213ENST00000530983 CERS2Q96G23 380 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 SGIP1Q9BQI5 828 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 NXF3Q9H4D5 531 aaKnown RBP19.75■□□□□ 0.75
VPS28-213ENST00000530983 PRDM12Q9H4Q4 367 aa19.75■□□□□ 0.75
VPS28-213ENST00000530983 E2F8A0AVK6 867 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 FKBP6O75344 327 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 POLBP06746 335 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 RALBP11234 206 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 GP5P40197 560 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 HARS2P49590 506 aaKnown RBP19.74■□□□□ 0.75
VPS28-213ENST00000530983 ABCE1P61221 599 aaKnown RBP19.74■□□□□ 0.75
VPS28-213ENST00000530983 PSTKQ8IV42 348 aaKnown RBP19.74■□□□□ 0.75
VPS28-213ENST00000530983 ANKRD13AQ8IZ07 590 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 OR6Y1Q8NGX8 325 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 FAM149B1Q96BN6 582 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 FCRL3Q96P31 734 aaPredicted RBP19.74■□□□□ 0.75
VPS28-213ENST00000530983 ECSITQ9BQ95 431 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 PPP1R12CQ9BZL4 782 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 ADAMTS10Q9H324 1103 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 RPS6KL1Q9Y6S9 549 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 SBF1O95248 1867 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.74■□□□□ 0.75
VPS28-213ENST00000530983 ARHGAP42A6NI28 874 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 PIRO00625 290 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 BUD23O43709 281 aaKnown RBP19.74■□□□□ 0.75
VPS28-213ENST00000530983 ITGA9Q13797 1035 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 DCAF6Q58WW2 860 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 SNX15Q9NRS6 342 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 TXNDC16Q9P2K2 825 aa19.74■□□□□ 0.75
VPS28-213ENST00000530983 SYNJ2BP-COX16A0A087WUM0 186 aa19.73■□□□□ 0.75
VPS28-213ENST00000530983 KPNA7A9QM74 516 aa19.73■□□□□ 0.75
VPS28-213ENST00000530983 CCNT2O60583 730 aaKnown RBP19.73■□□□□ 0.75
VPS28-213ENST00000530983 RECQL4O94761 1208 aa19.73■□□□□ 0.75
VPS28-213ENST00000530983 MAGEA12P43365 314 aa19.73■□□□□ 0.75
VPS28-213ENST00000530983 ADIGQ0VDE8 80 aa19.73■□□□□ 0.75
VPS28-213ENST00000530983 CDC16Q13042 620 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms