RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 LUC7L3O95232 432 aaKnown RBP21.64■■□□□ 1.05
SMPD1-204ENST00000530395 SEMA4FO95754 770 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 TRUB2O95900 331 aaKnown RBP21.64■■□□□ 1.05
SMPD1-204ENST00000530395 ACSL1P33121 698 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 MATKP42679 507 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 SFSWAPQ12872 951 aaKnown RBP21.64■■□□□ 1.05
SMPD1-204ENST00000530395 EXOC3L4Q17RC7 722 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 ZNF423Q2M1K9 1284 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 DCAF6Q58WW2 860 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 GJB7Q6PEY0 223 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 CHSY1Q86X52 802 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 LGI2Q8N0V4 545 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 CFAP52Q8N1V2 620 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 LMLNQ96KR4 655 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 BTN2A3PQ96KV6 586 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 C6orf106Q9H6K1 298 aaPredicted RBP21.64■■□□□ 1.05
SMPD1-204ENST00000530395 FAM204AQ9H8W3 233 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 SGK2Q9HBY8 427 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 SLC12A6Q9UHW9 1150 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 CYTH4Q9UIA0 394 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 SCML1Q9UN30 329 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 NCKAP1Q9Y2A7 1128 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 CEP83Q9Y592 693 aa21.64■■□□□ 1.05
SMPD1-204ENST00000530395 GTPBP10A4D1E9 387 aaKnown RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 TMEM8BA6NDV4 472 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 HYAL3O43820 417 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 SH3BP5O60239 455 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 SLC9A1P19634 815 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 MTIF2P46199 727 aaKnown RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 AFF3P51826 1226 aaKnown RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 TRIP6Q15654 476 aaKnown RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 TPD52L1Q16890 204 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 HNRNPA1L2Q32P51 320 aaKnown RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 ZC3H12AQ5D1E8 599 aaKnown RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 PITRM1Q5JRX3 1037 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 RAP1GAP2Q684P5 730 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 SMYD5Q6GMV2 418 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 ATP6V0D2Q8N8Y2 350 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 KDM1BQ8NB78 822 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 MYEOVQ96EZ4 313 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 NOX5Q96PH1 765 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 RSPH9Q9H1X1 276 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 GAREM1Q9H706 876 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 ACP6Q9NPH0 428 aa21.63■■□□□ 1.05
SMPD1-204ENST00000530395 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 KIAA1522Q9P206 1035 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-204ENST00000530395 BECN2A8MW95 431 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 F5H5T6 163 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 IGLV3-25P01717 112 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 GLI1P08151 1106 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 SRPRAP08240 638 aaKnown RBP21.62■■□□□ 1.05
SMPD1-204ENST00000530395 ZNF883P0CG24 379 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 SLC2A3P11169 496 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 TACR2P21452 398 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 FAM193AP78312 1265 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 CDK17Q00537 523 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 TEAD4Q15561 434 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 RNF219Q5W0B1 726 aaPredicted RBP21.62■■□□□ 1.05
SMPD1-204ENST00000530395 MLKLQ8NB16 471 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 C1orf216Q8TAB5 229 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 GANCQ8TET4 914 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 SHC3Q92529 594 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 MYO19Q96H55 970 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 CAMK1GQ96NX5 476 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 INTS6Q9UL03 887 aaKnown RBP21.62■■□□□ 1.05
SMPD1-204ENST00000530395 ZZEF1O43149 2961 aa21.62■■□□□ 1.05
SMPD1-204ENST00000530395 SIN3BO75182 1162 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 SNX16P57768 344 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 ARID5BQ14865 1188 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 FSCBQ5H9T9 825 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 EFHC1Q5JVL4 640 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 TTC39BQ5VTQ0 682 aaPredicted RBP21.61■■□□□ 1.05
SMPD1-204ENST00000530395 MMS22LQ6ZRQ5 1243 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 USP30Q70CQ3 517 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 DHX40Q8IX18 779 aaKnown RBP21.61■■□□□ 1.05
SMPD1-204ENST00000530395 PPP1R13BQ96KQ4 1090 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 MRGPRX3Q96LB0 322 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 PABPC3Q9H361 631 aaKnown RBP21.61■■□□□ 1.05
SMPD1-204ENST00000530395 OSGEPQ9NPF4 335 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 ASNSD1Q9NWL6 643 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 XPO7Q9UIA9 1087 aaKnown RBP21.61■■□□□ 1.05
SMPD1-204ENST00000530395 PCDHGC3Q9UN70 934 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 ERVW-1Q9UQF0 538 aa21.61■■□□□ 1.05
SMPD1-204ENST00000530395 TP53BP1Q12888 1972 aaPredicted RBP21.6■■□□□ 1.05
SMPD1-204ENST00000530395 A0A1B0GVT2 93 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 TARSL2A2RTX5 802 aaKnown RBP21.6■■□□□ 1.05
SMPD1-204ENST00000530395 KCNU1A8MYU2 1149 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 HSF2BPO75031 334 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 FSBPO95073 299 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 ABCB4P21439 1286 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 PON1P27169 355 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 ECT2LQ008S8 904 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 PTK2Q05397 1052 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 SLC12A1Q13621 1099 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 HLA-BQ31612 363 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 RABGAP1LQ5R372 815 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 PASD1Q8IV76 773 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 FAM114A1Q8IWE2 563 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 KDF1Q8NAX2 398 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms