RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	FAM90A7P	A6NKC0	464 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	LINC00473	A8K010	186 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	FAM90A22P	A8MWA6	464 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	FAM90A12P	A8MX19	464 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	FAM90A23P	A8MXZ1	464 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	TTC34	A8MYJ7	566 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	FYB1	O15117	783 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	ESRRB	O95718	433 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	F9	P00740	461 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	EBLN1	P0CF75	366 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	APEH	P13798	732 aa	Known RBP	4.36	□□□□□ -1.71
RDX-208	ENST00000530085	AVPR2	P30518	371 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	ADRA1B	P35368	520 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	PAFAH1B1	P43034	410 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	CCT8	P50990	548 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	WDR5	P61964	334 aa	Known RBP	4.36	□□□□□ -1.71
RDX-208	ENST00000530085	MRPS35	P82673	323 aa	Known RBP	4.36	□□□□□ -1.71
RDX-208	ENST00000530085	MPP3	Q13368	585 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	PDE1C	Q14123	709 aa	Predicted RBP	4.36	□□□□□ -1.71
RDX-208	ENST00000530085	KRT32	Q14532	448 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	TST	Q16762	297 aa	Known RBP	4.36	□□□□□ -1.71
RDX-208	ENST00000530085	PRICKLE4	Q2TBC4	344 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	LSM12	Q3MHD2	195 aa	Known RBP	4.36	□□□□□ -1.71
RDX-208	ENST00000530085	LAIR1	Q6GTX8	287 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	H1FNT	Q75WM6	255 aa	Predicted RBP	4.36	□□□□□ -1.71
RDX-208	ENST00000530085	CHD1L	Q86WJ1	897 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	BEND2	Q8NDZ0	799 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	ADAMTS15	Q8TE58	950 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	KCNJ9	Q92806	393 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	RNFT2	Q96EX2	444 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	HTATIP2	Q9BUP3	242 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	ADGRE3	Q9BY15	652 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	RNF26	Q9BY78	433 aa	Predicted RBP	4.36	□□□□□ -1.71
RDX-208	ENST00000530085	CYP4F11	Q9HBI6	524 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	SLC22A11	Q9NSA0	550 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	TFCP2L1	Q9NZI6	479 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	LRIT1	Q9P2V4	623 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	ORC3	Q9UBD5	711 aa	Predicted RBP	4.36	□□□□□ -1.71
RDX-208	ENST00000530085	KL	Q9UEF7	1012 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	ST3GAL5	Q9UNP4	418 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	NAALADL1	Q9UQQ1	740 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	SPATA31A1	Q5TZJ5	1347 aa		4.36	□□□□□ -1.71
RDX-208	ENST00000530085	TDRD9	Q8NDG6	1382 aa	Known RBP	4.36	□□□□□ -1.71
RDX-208	ENST00000530085	DYTN	A2CJ06	578 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	NPIPB13	A6NJU9	1138 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	NPIPB5	A8MRT5	1133 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	NPIPB4	C9JG80	1138 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085		H3BNC9	293 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	CLIC1	O00299	241 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	METTL18	O95568	372 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	MT-CO3	P00414	261 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	HSP90AA1	P07900	732 aa	Known RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	LYL1	P12980	280 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	ARSA	P15289	507 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	ATF7	P17544	494 aa	Predicted RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	PRPH2	P23942	346 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	PRKCH	P24723	683 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	SLC8A1	P32418	973 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	HOXD12	P35452	270 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	STAT6	P42226	847 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	AVPR1B	P47901	424 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	CCR9	P51686	369 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	HMGA2	P52926	109 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	MVD	P53602	400 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	SLC37A1	P57057	533 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	FOXI1	Q12951	378 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	ALKBH1	Q13686	389 aa	Known RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	CNGA3	Q16281	694 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	ERCC6L	Q2NKX8	1250 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	RUNDC3A	Q59EK9	446 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	MTFR2	Q6P444	385 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	INO80C	Q6PI98	192 aa	Predicted RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	ENDOV	Q8N8Q3	282 aa	Known RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	TERB1	Q8NA31	727 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	ANKRD52	Q8NB46	1076 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	MAFA	Q8NHW3	353 aa	Predicted RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	ACTRT2	Q8TDY3	377 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	CAVIN3	Q969G5	261 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	SH3KBP1	Q96B97	665 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	PDLIM2	Q96JY6	352 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	CD180	Q99467	661 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	BARD1	Q99728	777 aa	Known RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	TREX2	Q9BQ50	279 aa	Predicted RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	CIPC	Q9C0C6	399 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	CTDSP1	Q9GZU7	261 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	SFXN1	Q9H9B4	322 aa		4.35	□□□□□ -1.71
RDX-208	ENST00000530085	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.35	□□□□□ -1.71
RDX-208	ENST00000530085	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.34	□□□□□ -1.71
RDX-208	ENST00000530085	ANKRD18B	A2A2Z9	1011 aa		4.34	□□□□□ -1.71
RDX-208	ENST00000530085		K7ENM7	598 aa		4.34	□□□□□ -1.71
RDX-208	ENST00000530085	PRY	O14603	147 aa		4.34	□□□□□ -1.71
RDX-208	ENST00000530085	TNPO2	O14787	897 aa	Known RBP	4.34	□□□□□ -1.71
RDX-208	ENST00000530085	TSPAN4	O14817	238 aa		4.34	□□□□□ -1.71
RDX-208	ENST00000530085	ORC4	O43929	436 aa		4.34	□□□□□ -1.71
RDX-208	ENST00000530085	ZBED4	O75132	1171 aa		4.34	□□□□□ -1.71
RDX-208	ENST00000530085	SLC3A2	P08195	630 aa	Known RBP	4.34	□□□□□ -1.71
RDX-208	ENST00000530085	NDUFS1	P28331	727 aa		4.34	□□□□□ -1.71
RDX-208	ENST00000530085	GGT5	P36269	586 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms