RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 KCNJ11Q14654 390 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 TMEM132DQ14C87 1099 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 WDR75Q8IWA0 830 aaKnown RBP14.58□□□□□ -0.08
USP48-213ENST00000529637 SULF1Q8IWU6 871 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 EXOC8Q8IYI6 725 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 LILRA2Q8N149 483 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 RNF148Q8N7C7 305 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 GNEQ9Y223 722 aaKnown RBP14.58□□□□□ -0.08
USP48-213ENST00000529637 E2F8A0AVK6 867 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 HBP1O60381 514 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 SFSWAPQ12872 951 aaKnown RBP14.58□□□□□ -0.08
USP48-213ENST00000529637 TFDP2Q14188 446 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 MBLAC2Q68D91 279 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 C7orf31Q8N865 590 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 COPS7BQ9H9Q2 264 aaPredicted RBP14.58□□□□□ -0.08
USP48-213ENST00000529637 TSPAN16Q9UKR8 245 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 ITGA11Q9UKX5 1188 aa14.58□□□□□ -0.08
USP48-213ENST00000529637 TNS1Q9HBL0 1735 aaKnown RBP14.57□□□□□ -0.08
USP48-213ENST00000529637 ZBTB14O43829 449 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 CILPO75339 1184 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 FGF3P11487 239 aaPredicted RBP14.57□□□□□ -0.08
USP48-213ENST00000529637 SLC1A6P48664 564 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 MTTPP55157 894 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 PDPK2PQ6A1A2 396 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 FNIP1Q8TF40 1166 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 LZICQ8WZA0 190 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 CNPY3Q9BT09 278 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 OXCT2Q9BYC2 517 aaPredicted RBP14.57□□□□□ -0.08
USP48-213ENST00000529637 MRPS26Q9BYN8 205 aaKnown RBP14.57□□□□□ -0.08
USP48-213ENST00000529637 POPDC2Q9HBU9 364 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 TXNRD2Q9NNW7 524 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 TIMMDC1Q9NPL8 285 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 PRMT7Q9NVM4 692 aaPredicted RBP14.57□□□□□ -0.08
USP48-213ENST00000529637 EMCNQ9ULC0 261 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 TNFSF13BQ9Y275 285 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 FOXD2O60548 495 aaPredicted RBP14.57□□□□□ -0.08
USP48-213ENST00000529637 KLHL2O95198 593 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 HDAC4P56524 1084 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 Q3C1V9 767 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 MAP1SQ66K74 1059 aaPredicted RBP14.57□□□□□ -0.08
USP48-213ENST00000529637 FAM183BPQ6ZVS7 135 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 CAND1Q86VP6 1230 aaKnown RBP14.57□□□□□ -0.08
USP48-213ENST00000529637 MPP5Q8N3R9 675 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 KIF12Q96FN5 646 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 PTPRHQ9HD43 1115 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 EFR3BQ9Y2G0 817 aa14.57□□□□□ -0.08
USP48-213ENST00000529637 ADCY6O43306 1168 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 GPD2P43304 727 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 MPP3Q13368 585 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 APOFQ13790 326 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 CYTH1Q15438 398 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 GOLGA7BQ2TAP0 167 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 CMASQ8NFW8 434 aaPredicted RBP14.56□□□□□ -0.08
USP48-213ENST00000529637 IRGQQ8WZA9 623 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 SORT1Q99523 831 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 INIPQ9NRY2 104 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 PSMD13Q9UNM6 376 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 TNFAIP8O95379 198 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 HMGCRP04035 888 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 TFPTP0C1Z6 253 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 VDRP11473 427 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 CRHR1P34998 444 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 ZNF143P52747 638 aaPredicted RBP14.56□□□□□ -0.08
USP48-213ENST00000529637 PLPPR4Q7Z2D5 763 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 ACOT1Q86TX2 421 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 SCUBE3Q8IX30 993 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 FNDC8Q8TC99 324 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 SIKE1Q9BRV8 207 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 BCO2Q9BYV7 579 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 SNX9Q9Y5X1 595 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 E9PBE3 544 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 KLHL41O60662 606 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 ZNF286BP0CG31 522 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 TSHRP16473 764 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 PROZP22891 400 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 RBL1P28749 1068 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 ADORA2AP29274 412 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 TTLL4Q14679 1199 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 LPIN1Q14693 890 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 AMHR2Q16671 573 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 ANKDD1AQ495B1 522 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 NOL9Q5SY16 702 aaKnown RBP14.56□□□□□ -0.08
USP48-213ENST00000529637 UNC5AQ6ZN44 842 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 NUP93Q8N1F7 819 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 ZBTB8BQ8NAP8 495 aaPredicted RBP14.56□□□□□ -0.08
USP48-213ENST00000529637 DCPSQ96C86 337 aaKnown RBP14.56□□□□□ -0.08
USP48-213ENST00000529637 ZFRQ96KR1 1074 aaKnown RBP14.56□□□□□ -0.08
USP48-213ENST00000529637 YIPF2Q9BWQ6 316 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 FRMD8P1Q9BZ68 369 aaPredicted RBP14.56□□□□□ -0.08
USP48-213ENST00000529637 ZNF696Q9H7X3 374 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 ERAP1Q9NZ08 941 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 SORCS3Q9UPU3 1222 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 PARP14Q460N5 1801 aa14.56□□□□□ -0.08
USP48-213ENST00000529637 IGKV6-21A0A0C4DH24 114 aa14.55□□□□□ -0.08
USP48-213ENST00000529637 TMEM221A6NGB7 291 aa14.55□□□□□ -0.08
USP48-213ENST00000529637 ZNF195O14628 629 aa14.55□□□□□ -0.08
USP48-213ENST00000529637 ARF4P18085 180 aaPredicted RBP14.55□□□□□ -0.08
USP48-213ENST00000529637 SDC4P31431 198 aa14.55□□□□□ -0.08
USP48-213ENST00000529637 SLC10A6Q3KNW5 377 aa14.55□□□□□ -0.08
USP48-213ENST00000529637 AHI1Q8N157 1196 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms