RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 TBC1D31Q96DN5 1066 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 RNF14Q9UBS8 474 aa25.49■■□□□ 1.67
LDLRAD3-203ENST00000528989 IGLV3-10A0A075B6K4 115 aa25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 ZNF487B1APH4 448 aa25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 F5H5T6 163 aa25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 KRIT1O00522 736 aa25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 DCLK1O15075 740 aa25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 PECAM1P16284 738 aaPredicted RBP25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 FCARP24071 287 aa25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 NCBP2-AS2Q69YL0 99 aa25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 LRRC31Q6UY01 552 aa25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 BBS12Q6ZW61 710 aa25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 DDX42Q86XP3 938 aaKnown RBP eCLIP25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 C1orf54Q8WWF1 131 aa25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 ZFP37Q9Y6Q3 630 aaPredicted RBP25.48■■□□□ 1.67
LDLRAD3-203ENST00000528989 LAMP2P13473 410 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 WEE1P30291 646 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 HOXC13P31276 330 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 SLC10A2Q12908 348 aaPredicted RBP25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 USP4Q13107 963 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 MTA1Q13330 715 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 TFAP2DQ7Z6R9 452 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 SPATA4Q8NEY3 305 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 LRRN4Q8WUT4 740 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 RBM12Q9NTZ6 932 aaKnown RBP25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 STIM2Q9P246 746 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 HEY1Q9Y5J3 304 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 WNT6Q9Y6F9 365 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 DRGXA6NNA5 263 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 APOL1O14791 398 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 GBE1Q04446 702 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 TPGS1Q6ZTW0 290 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 B4GALNT4Q76KP1 1039 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 NPWQ8N729 165 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 PRELID2Q8N945 189 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 HLA-CQ95604 372 aa25.47■■□□□ 1.67
LDLRAD3-203ENST00000528989 LATS1O95835 1130 aa25.46■■□□□ 1.67
LDLRAD3-203ENST00000528989 TFDP2Q14188 446 aa25.46■■□□□ 1.67
LDLRAD3-203ENST00000528989 NLRP14Q86W24 1093 aa25.46■■□□□ 1.67
LDLRAD3-203ENST00000528989 FAM217AQ8IXS0 508 aa25.46■■□□□ 1.67
LDLRAD3-203ENST00000528989 NECTIN4Q96NY8 510 aa25.46■■□□□ 1.67
LDLRAD3-203ENST00000528989 NAP1L3Q99457 506 aaPredicted RBP25.46■■□□□ 1.67
LDLRAD3-203ENST00000528989 ZYG11BQ9C0D3 744 aa25.46■■□□□ 1.67
LDLRAD3-203ENST00000528989 PPARGC1AQ9UBK2 798 aaKnown RBP25.46■■□□□ 1.67
LDLRAD3-203ENST00000528989 DOCK8Q8NF50 2099 aa25.46■■□□□ 1.67
LDLRAD3-203ENST00000528989 HEPACAM2A8MVW5 462 aa25.45■■□□□ 1.67
LDLRAD3-203ENST00000528989 GFRA2O00451 464 aa25.45■■□□□ 1.67
LDLRAD3-203ENST00000528989 C2orf54Q08AI8 447 aa25.45■■□□□ 1.67
LDLRAD3-203ENST00000528989 PARM1Q6UWI2 310 aa25.45■■□□□ 1.67
LDLRAD3-203ENST00000528989 ZFYVE19Q96K21 471 aa25.45■■□□□ 1.67
LDLRAD3-203ENST00000528989 RPP25Q9BUL9 199 aaKnown RBP25.45■■□□□ 1.67
LDLRAD3-203ENST00000528989 PLA2G2FQ9BZM2 168 aa25.45■■□□□ 1.67
LDLRAD3-203ENST00000528989 TRPV4Q9HBA0 871 aa25.45■■□□□ 1.67
LDLRAD3-203ENST00000528989 PLK2Q9NYY3 685 aa25.45■■□□□ 1.67
LDLRAD3-203ENST00000528989 ZNF510Q9Y2H8 683 aa25.45■■□□□ 1.67
LDLRAD3-203ENST00000528989 MBTPS2O43462 519 aa25.45■■□□□ 1.66
LDLRAD3-203ENST00000528989 TCF3P15923 654 aa25.45■■□□□ 1.66
LDLRAD3-203ENST00000528989 ZNF135P52742 658 aaPredicted RBP25.45■■□□□ 1.66
LDLRAD3-203ENST00000528989 SNX1Q13596 522 aa25.45■■□□□ 1.66
LDLRAD3-203ENST00000528989 C5orf22Q49AR2 442 aa25.45■■□□□ 1.66
LDLRAD3-203ENST00000528989 TMCO3Q6UWJ1 677 aa25.45■■□□□ 1.66
LDLRAD3-203ENST00000528989 ACTL9Q8TC94 416 aa25.45■■□□□ 1.66
LDLRAD3-203ENST00000528989 FGF14Q92915 247 aa25.45■■□□□ 1.66
LDLRAD3-203ENST00000528989 ZFP14Q9HCL3 533 aa25.45■■□□□ 1.66
LDLRAD3-203ENST00000528989 HELZP42694 1942 aaKnown RBP25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 RIOK3O14730 519 aaKnown RBP25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 MFSD11O43934 449 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 NUMBP49757 651 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 OTUD4Q01804 1114 aaKnown RBP25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 FAM182AQ5T1J6 154 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 ACBD5Q5T8D3 534 aaPredicted RBP25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 TRIM68Q6AZZ1 485 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 ADGRG2Q8IZP9 1017 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 TDRD5Q8NAT2 981 aaKnown RBP25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 TMA16Q96EY4 203 aaKnown RBP25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 ASIC4Q96FT7 647 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 CELF6Q96J87 481 aaKnown RBP25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 KLC2Q9H0B6 622 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 CATSPERBQ9H7T0 1116 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 C10orf88Q9H8K7 445 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 DTLQ9NZJ0 730 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 ZNF212Q9UDV6 495 aa25.44■■□□□ 1.66
LDLRAD3-203ENST00000528989 APOC4-APOC2K7ER74 178 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 APOC2P02655 101 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 CHKAP35790 457 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 CKAP4Q07065 602 aaKnown RBP25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 VITQ6UXI7 678 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 ZNF572Q7Z3I7 529 aaPredicted RBP25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 TMEM25Q86YD3 366 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 RTL3Q8N8U3 475 aaKnown RBP25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 BPIFB1Q8TDL5 484 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 P3H4Q92791 437 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 DDX50Q9BQ39 737 aaKnown RBP25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 KXD1Q9BQD3 176 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 DDX47Q9H0S4 455 aaKnown RBP25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 KIF9Q9HAQ2 790 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 TBL1XO60907 577 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 RHOQP17081 205 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 HTR7P34969 479 aa25.43■■□□□ 1.66
LDLRAD3-203ENST00000528989 KLHL7Q8IXQ5 586 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms