RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 PKP4Q99569 1192 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 HIST1H2AJQ99878 128 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 MRPL1Q9BYD6 325 aaKnown RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 SLC5A7Q9GZV3 580 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 SH2D4AQ9H788 454 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 SCPEP1Q9HB40 452 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 TCP11L1Q9NUJ3 509 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 ATAD3AQ9NVI7 634 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 POLR3BQ9NW08 1133 aaPredicted RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 FTSJ1Q9UET6 329 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 FAM153AQ9UHL3 310 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 LEF1Q9UJU2 399 aaPredicted RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 YTHDC2Q9H6S0 1430 aaKnown RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 RPTORQ8N122 1335 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 GCOM1H8Y6P7 765 aaPredicted RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 VWA5AO00534 786 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 CTDSP2O14595 271 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SLC27A2O14975 620 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 GRM6O15303 877 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 RRP9O43818 475 aaKnown RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 PIK3C2GO75747 1445 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 AMY1AP04745 511 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 FYNP06241 537 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SYPP08247 313 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 PRR35P0CG20 571 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 PTPN3P26045 913 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 MSX2P35548 267 aaPredicted RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SOX6P35712 828 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SKIV2L2P42285 1042 aaKnown RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 MAGEA10P43363 369 aaPredicted RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SLC11A2P49281 568 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 CASP9P55211 416 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 EIF3BP55884 814 aaKnown RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 MEF2AQ02078 507 aaPredicted RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 DEUP1Q05D60 604 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 TEFQ10587 303 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SP140Q13342 867 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 TUBB3Q13509 450 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 ALCAMQ13740 583 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 BAATQ14032 418 aaPredicted RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 NOLC1Q14978 699 aaKnown RBP eCLIP7.48□□□□□ -1.215e-6■□□□□ 10.3
FDFT1-213ENST00000528729 PDK1Q15118 436 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 ANKRD20A4Q4UJ75 823 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SLC39A12Q504Y0 691 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 ANKRD20A8PQ5CZ79 823 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 RNFT1Q5M7Z0 435 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 CBWD5Q5RIA9 395 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 ANKRD20A2Q5SQ80 823 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 ANKRD20A1Q5TYW2 823 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 ANKRD20A3Q5VUR7 823 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 WFDC8Q8IUA0 241 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 ELOA2Q8IYF1 753 aaPredicted RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SLC15A4Q8N697 577 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 ANKRD53Q8N9V6 530 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 FAM181AQ8N9Y4 354 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SMG8Q8ND04 991 aaKnown RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 GIMAP7Q8NHV1 300 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 CORO2AQ92828 525 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 ELP4Q96EB1 424 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 RBM17Q96I25 401 aaKnown RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 DGAT2Q96PD7 388 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 RBM14Q96PK6 669 aaKnown RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 RUFY1Q96T51 708 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 TRIM7Q9C029 511 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 CLSTN2Q9H4D0 955 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 STN1Q9H668 368 aaKnown RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SPATS2LQ9NUQ6 558 aaKnown RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 ZSCAN32Q9NX65 697 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 OSGIN1Q9UJX0 560 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 TCFL5Q9UL49 500 aa7.48□□□□□ -1.21
FDFT1-213ENST00000528729 PPIEQ9UNP9 301 aaKnown RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 RPH3AQ9Y2J0 694 aaPredicted RBP7.48□□□□□ -1.21
FDFT1-213ENST00000528729 SHPRHQ149N8 1683 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 SBNO1A3KN83 1393 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 KDRP35968 1356 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 PLEKHH1Q9ULM0 1364 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 GOLGA6L10A0A0M3HER8 536 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.47□□□□□ -1.21
FDFT1-213ENST00000528729 J3KTA2 159 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 DLL1O00548 723 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 MAGEB3O15480 346 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 VEGFDO43915 354 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 SIX3O95343 332 aaPredicted RBP7.47□□□□□ -1.21
FDFT1-213ENST00000528729 ALPPP05187 535 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 CYP21A2P08686 494 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 TPBGLP0DKB5 382 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 ALPPL2P10696 532 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 HSPA5P11021 654 aaKnown RBP7.47□□□□□ -1.21
FDFT1-213ENST00000528729 GDI1P31150 447 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 CCR10P46092 362 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 ARCN1P48444 511 aaKnown RBP7.47□□□□□ -1.21
FDFT1-213ENST00000528729 BMXP51813 675 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 GBX2P52951 348 aaPredicted RBP7.47□□□□□ -1.21
FDFT1-213ENST00000528729 CDH15P55291 814 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 PCBP3P57721 371 aaKnown RBP7.47□□□□□ -1.21
FDFT1-213ENST00000528729 PTSQ03393 145 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 KIF5AQ12840 1032 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 RIPK1Q13546 671 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 ATP1A4Q13733 1029 aa7.47□□□□□ -1.21
FDFT1-213ENST00000528729 IMMTQ16891 758 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms