RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ASLP04424 464 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 PTGER3P43115 390 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 COPAP53621 1224 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 ANO6Q4KMQ2 910 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 FAM102AQ5T9C2 384 aaPredicted RBP34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 LYSMD4Q5XG99 296 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 ARCQ7LC44 396 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 TMPRSS6Q8IU80 811 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 CFAP52Q8N1V2 620 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 CARNMT1Q8N4J0 409 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 KDM1BQ8NB78 822 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 ERLEC1Q96DZ1 483 aa34.17■■■■□ 3.06
SSSCA1-205ENST00000527920 M0QYT0 321 aa34.16■■■■□ 3.06
SSSCA1-205ENST00000527920 CYP1A1P04798 512 aaPredicted RBP34.16■■■■□ 3.06
SSSCA1-205ENST00000527920 OTUD1Q5VV17 481 aaPredicted RBP34.16■■■■□ 3.06
SSSCA1-205ENST00000527920 PEAR1Q5VY43 1037 aaPredicted RBP34.16■■■■□ 3.06
SSSCA1-205ENST00000527920 CAVIN1Q6NZI2 390 aaKnown RBP34.16■■■■□ 3.06
SSSCA1-205ENST00000527920 TRIM72Q6ZMU5 477 aa34.16■■■■□ 3.06
SSSCA1-205ENST00000527920 SYT12Q8IV01 421 aa34.16■■■■□ 3.06
SSSCA1-205ENST00000527920 KIAA1522Q9P206 1035 aaPredicted RBP34.16■■■■□ 3.06
SSSCA1-205ENST00000527920 EVLQ9UI08 416 aaPredicted RBP34.16■■■■□ 3.06
SSSCA1-205ENST00000527920 INTS6Q9UL03 887 aaKnown RBP34.16■■■■□ 3.06
SSSCA1-205ENST00000527920 SYNJ2BP-COX16A0A087WUM0 186 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 F9P00740 461 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 IGLV3-19P01714 112 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 FMO1Q01740 532 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 NME3Q13232 169 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 BRMS1LQ5PSV4 323 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 RABGAP1LQ5R372 815 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 NAA35Q5VZE5 725 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 OR2T3Q8NH03 318 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 SLC20A1Q8WUM9 679 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 PIGKQ92643 395 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 PRCCQ92733 491 aaPredicted RBP34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 SIPA1Q96FS4 1042 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 PCMTD1Q96MG8 357 aaPredicted RBP34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 ITM2CQ9NQX7 267 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 COX16Q9P0S2 106 aa34.15■■■■□ 3.06
SSSCA1-205ENST00000527920 NUP205Q92621 2012 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 A0A1B0GVM2 712 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 TCAF2A6NFQ2 919 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 H0Y626 953 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 KHNYNO15037 678 aaKnown RBP34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 ATP1A3P13637 1013 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 HLA-EP13747 358 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 CSKP41240 450 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 CXCR3P49682 368 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 SLC12A1Q13621 1099 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 SLC25A52Q3SY17 297 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 FSCBQ5H9T9 825 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 TCEAL6Q6IPX3 200 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 CPA5Q8WXQ8 436 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 TCEAL3Q969E4 200 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 RXFP3Q9NSD7 469 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 PIGVQ9NUD9 493 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 PAXBP1Q9Y5B6 917 aa34.14■■■■□ 3.06
SSSCA1-205ENST00000527920 SMTNL1A8MU46 457 aa34.13■■■■□ 3.05
SSSCA1-205ENST00000527920 MOCS3O95396 460 aa34.13■■■■□ 3.05
SSSCA1-205ENST00000527920 CHRNB2P17787 502 aa34.13■■■■□ 3.05
SSSCA1-205ENST00000527920 CD6P30203 668 aa34.13■■■■□ 3.05
SSSCA1-205ENST00000527920 OXCT1P55809 520 aa34.13■■■■□ 3.05
SSSCA1-205ENST00000527920 ARID5BQ14865 1188 aa34.13■■■■□ 3.05
SSSCA1-205ENST00000527920 ARHGEF38Q9NXL2 777 aa34.13■■■■□ 3.05
SSSCA1-205ENST00000527920 SUN2Q9UH99 717 aa34.13■■■■□ 3.05
SSSCA1-205ENST00000527920 TMEM59LQ9UK28 342 aa34.13■■■■□ 3.05
SSSCA1-205ENST00000527920 PILRBQ9UKJ0 227 aa34.13■■■■□ 3.05
SSSCA1-205ENST00000527920 MMP8P22894 467 aa34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 OXTRP30559 389 aa34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 RNASE9P60153 205 aaKnown RBP34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 ZNF33AQ06730 810 aa34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 AUHQ13825 339 aaKnown RBP34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 PITRM1Q5JRX3 1037 aa34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 ACBD5Q5T8D3 534 aaPredicted RBP34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 FBXL22Q6P050 247 aa34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 SND1Q7KZF4 910 aaKnown RBP eCLIP34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 ARMCX6Q7L4S7 300 aa34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 DHX40Q8IX18 779 aaKnown RBP34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 MYO19Q96H55 970 aa34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 ADAM33Q9BZ11 813 aa34.12■■■■□ 3.05
SSSCA1-205ENST00000527920 LNP1A1A4G5 178 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 NDUFS2O75306 463 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 SULT1E1P49888 294 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 TPMTP51580 245 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 ST8SIA6P61647 398 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 PLEKHG6Q3KR16 790 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 C5orf22Q49AR2 442 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 STPG1Q5TH74 334 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 RABEPKQ7Z6M1 372 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 CCAR2Q8N163 923 aaKnown RBP34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 FOXJ1Q92949 421 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 ZNF419Q96HQ0 510 aaPredicted RBP34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 EDEM2Q9BV94 578 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 CD93Q9NPY3 652 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 WSB2Q9NYS7 404 aaPredicted RBP34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 HS3ST4Q9Y661 456 aa34.11■■■■□ 3.05
SSSCA1-205ENST00000527920 GON4LQ3T8J9 2241 aa34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 TNRC6BQ9UPQ9 1833 aaKnown RBP34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 PAGE1O75459 146 aa34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 SRPRAP08240 638 aaKnown RBP34.1■■■■□ 3.05
SSSCA1-205ENST00000527920 FLT3P36888 993 aa34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms