RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 KCNU1A8MYU2 1149 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 H0Y626 953 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 GIPC1O14908 333 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 HSF2BPO75031 334 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 LUC7L3O95232 432 aaKnown RBP14.69□□□□□ -0.06
CAPN1-212ENST00000527887 HLA-EP13747 358 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 ABCB4P21439 1286 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 CCR1P32246 355 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 RPS24P62847 133 aaKnown RBP14.69□□□□□ -0.06
CAPN1-212ENST00000527887 TTC31Q49AM3 519 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-212ENST00000527887 VWA3BQ502W6 1294 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 DCAF12L1Q5VU92 463 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 ZNF776Q68DI1 518 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-212ENST00000527887 GJB7Q6PEY0 223 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 C11orf57Q6ZUT1 292 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-212ENST00000527887 USP30Q70CQ3 517 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 ZDHHC17Q8IUH5 632 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 CARNMT1Q8N4J0 409 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 WDTC1Q8N5D0 677 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 DEFB124Q8NES8 71 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 ADAM32Q8TC27 787 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 WFDC5Q8TCV5 224 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 SLC2A13Q96QE2 648 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 BTBD1Q9H0C5 482 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 NUCKS1Q9H1E3 243 aaKnown RBP14.69□□□□□ -0.06
CAPN1-212ENST00000527887 NUP62CLQ9H1M0 184 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 NDST4Q9H3R1 872 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 SGK2Q9HBY8 427 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 OSGEPQ9NPF4 335 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 RRN3Q9NYV6 651 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 NCKAP1Q9Y2A7 1128 aa14.69□□□□□ -0.06
CAPN1-212ENST00000527887 F5H5T6 163 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 BCAT2O15382 392 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-212ENST00000527887 GJB3O75712 270 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 TRIM16O95361 564 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 MOCS2O96007 188 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-212ENST00000527887 ZNF883P0CG24 379 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 TACR2P21452 398 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 MAOBP27338 520 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 CSKP41240 450 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 RPS14P62263 151 aaKnown RBP14.68□□□□□ -0.06
CAPN1-212ENST00000527887 SULT2A1Q06520 285 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 HNRNPA1L2Q32P51 320 aaKnown RBP14.68□□□□□ -0.06
CAPN1-212ENST00000527887 ZC3H12AQ5D1E8 599 aaKnown RBP14.68□□□□□ -0.06
CAPN1-212ENST00000527887 RABGAP1LQ5R372 815 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 CHSY1Q86X52 802 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 LGI2Q8N0V4 545 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 C1orf131Q8NDD1 294 aaKnown RBP14.68□□□□□ -0.06
CAPN1-212ENST00000527887 CPXM1Q96SM3 734 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 TUBGCP2Q9BSJ2 902 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 RSPH9Q9H1X1 276 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-212ENST00000527887 ACP6Q9NPH0 428 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 DNAJC12Q9UKB3 198 aa14.68□□□□□ -0.06
CAPN1-212ENST00000527887 INTS6Q9UL03 887 aaKnown RBP14.68□□□□□ -0.06
CAPN1-212ENST00000527887 FOXN3O00409 490 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-212ENST00000527887 CD59P13987 128 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 NOS2P35228 1153 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 NNMTP40261 264 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 VASPP50552 380 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-212ENST00000527887 AFF3P51826 1226 aaKnown RBP14.67□□□□□ -0.06
CAPN1-212ENST00000527887 PLK1P53350 603 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 ECT2LQ008S8 904 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 GRIK2Q13002 908 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 ST3GAL2Q16842 350 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 PITRM1Q5JRX3 1037 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 ACBD5Q5T8D3 534 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-212ENST00000527887 RNF219Q5W0B1 726 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-212ENST00000527887 RAP1GAP2Q684P5 730 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 LRSAM1Q6UWE0 723 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 SLC26A9Q7LBE3 791 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 FAM71AQ8IYT1 594 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 DEFB106AQ8N104 65 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 TMEM35BQ8NCS4 154 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 ZNF397Q8NF99 534 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-212ENST00000527887 C1orf216Q8TAB5 229 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 MYO19Q96H55 970 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 MRGPRX3Q96LB0 322 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 MIR1-1HGQ9H1L0 117 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 FAM204AQ9H8W3 233 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 SIX2Q9NPC8 291 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 FSCN3Q9NQT6 498 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 DDIT4Q9NX09 232 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 TPX2Q9ULW0 747 aaKnown RBP14.67□□□□□ -0.06
CAPN1-212ENST00000527887 WASF3Q9UPY6 502 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 ERVW-1Q9UQF0 538 aa14.67□□□□□ -0.06
CAPN1-212ENST00000527887 KMT2BQ9UMN6 2715 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-212ENST00000527887 ITIH6Q6UXX5 1313 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 TNRC6BQ9UPQ9 1833 aaKnown RBP14.66□□□□□ -0.06
CAPN1-212ENST00000527887 SEMA4FO95754 770 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 CER1O95813 267 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 EEF1GP26641 437 aaKnown RBP14.66□□□□□ -0.06
CAPN1-212ENST00000527887 ACSL1P33121 698 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 CLCN1P35523 988 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 SCNN1AP37088 669 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 SLC6A3Q01959 620 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 FOXC1Q12948 553 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 TAF5Q15542 800 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 TEAD4Q15561 434 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 ZNF423Q2M1K9 1284 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 FSCBQ5H9T9 825 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms