RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 PCDH12Q9NPG4 1184 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 CD93Q9NPY3 652 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 ARHGEF4Q9NR80 690 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.97□□□□□ -1.45
CD44-225ENST00000527326 SLC39A1Q9NY26 324 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 MRPL39Q9NYK5 338 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 TAS2R7Q9NYW3 318 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 NPAP1Q9NZP6 1156 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 KANSL3Q9P2N6 904 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 PI4KBQ9UBF8 816 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 SOX13Q9UN79 622 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 MAU2Q9Y6X3 613 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 MYH4Q9Y623 1939 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 SYNGAP1Q96PV0 1343 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.96□□□□□ -1.45
CD44-225ENST00000527326 TRPC5OSA6NMA1 111 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 C16orf96A6NNT2 1141 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CAPN14A8MX76 684 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CLDN25C9JDP6 229 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 TRIM77I1YAP6 450 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 TNFRSF10BO14763 440 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 TNPO2O14787 897 aaKnown RBP5.96□□□□□ -1.46
CD44-225ENST00000527326 THAP12O43422 761 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 GAS2O43903 313 aaKnown RBP5.96□□□□□ -1.46
CD44-225ENST00000527326 FZD6O60353 706 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 DEAF1O75398 565 aaPredicted RBP5.96□□□□□ -1.46
CD44-225ENST00000527326 CLPXO76031 633 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 FGF18O76093 207 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 EPN2O95208 641 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 IGHA2P01877 340 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 HLA-DRAP01903 254 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CAPNS1P04632 268 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 KRT7P08729 469 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 HOXB7P09629 217 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 MCF2P10911 925 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 PCNAP12004 261 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 KRT10P13645 584 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CPB1P15086 417 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 ELNP15502 786 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 IFNAR1P17181 557 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 ITIH2P19823 946 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 IL10P22301 178 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 TGM1P22735 817 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 LTKP29376 864 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CASP1P29466 404 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 RPL9P32969 192 aaKnown RBP5.96□□□□□ -1.46
CD44-225ENST00000527326 ARL1P40616 181 aaPredicted RBP5.96□□□□□ -1.46
CD44-225ENST00000527326 HADHAP40939 763 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 BTDP43251 543 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 ZAP70P43403 619 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 EIF1AXP47813 144 aaKnown RBP5.96□□□□□ -1.46
CD44-225ENST00000527326 IDH3AP50213 366 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 AFF1P51825 1210 aaKnown RBP5.96□□□□□ -1.46
CD44-225ENST00000527326 PMS1P54277 932 aaKnown RBP5.96□□□□□ -1.46
CD44-225ENST00000527326 UBXN2AP68543 259 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CYP4F2P78329 520 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CYP4F3Q08477 520 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 KLHL30Q0D2K2 578 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 GALNT2Q10471 571 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 SP140Q13342 867 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 TRPC3Q13507 836 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CCNIQ14094 377 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 UBE4AQ14139 1066 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 TFDP1Q14186 410 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 ADGRE1Q14246 886 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 HERC3Q15034 1050 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CDK10Q15131 360 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 LRRC36Q1X8D7 754 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 LRIT3Q3SXY7 679 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 IGSF11Q5DX21 431 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 KCNT1Q5JUK3 1230 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 FAM26DQ5JW98 314 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 NKAPLQ5M9Q1 402 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 RABGAP1LQ5R372 815 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 COX20Q5RI15 118 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 FAM205BPQ63HN1 556 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 GTF2IRD2BQ6EKJ0 949 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 KRT80Q6KB66 452 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 SYCE2Q6PIF2 218 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CHST3Q7LGC8 479 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 GSTA5Q7RTV2 222 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 KRT25Q7Z3Z0 450 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 HDDC2Q7Z4H3 204 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 GTF2IRD2Q86UP8 949 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 FAM35AQ86V20 835 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 TRABD2AQ86V40 505 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 ZNF677Q86XU0 584 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 RELL1Q8IUW5 271 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 CHERPQ8IWX8 916 aaKnown RBP5.96□□□□□ -1.46
CD44-225ENST00000527326 COLGALT2Q8IYK4 626 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 POU5F2Q8N7G0 328 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 KIAA1958Q8N8K9 716 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 C12orf50Q8NA57 414 aaPredicted RBP5.96□□□□□ -1.46
CD44-225ENST00000527326 PJA1Q8NG27 643 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 PYDC1Q8WXC3 89 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 ZUFSPQ96AP4 578 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 MAP6Q96JE9 813 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 TMEM87BQ96K49 555 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 C8orf37Q96NL8 207 aa5.96□□□□□ -1.46
CD44-225ENST00000527326 FERD3LQ96RJ6 166 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms