RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 RPS14P62263 151 aaKnown RBP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 CDK17Q00537 523 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 SLC6A3Q01959 620 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 ARID5AQ03989 594 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 KRT31Q15323 416 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 UAP1L1Q3KQV9 507 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 PITRM1Q5JRX3 1037 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 EFHC1Q5JVL4 640 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 SLC26A9Q7LBE3 791 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 C14orf80Q86SX3 495 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 NOP9Q86U38 636 aaKnown RBP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 FAM124AQ86V42 546 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 CHSY1Q86X52 802 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 CIR1Q86X95 450 aaPredicted RBP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 APCDD1Q8J025 514 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 ZNF397Q8NF99 534 aaPredicted RBP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 IGSF8Q969P0 613 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 BTN2A3PQ96KV6 586 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 CNTNAP3BQ96NU0 1288 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 DDX50Q9BQ39 737 aaKnown RBP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 TRIM62Q9BVG3 475 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 GPR174Q9BXC1 333 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 NUSAP1Q9BXS6 441 aaKnown RBP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 CNTNAP3Q9BZ76 1288 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 GANQ9H2C0 597 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 FAM204AQ9H8W3 233 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 FANCLQ9NW38 375 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 DDIT4Q9NX09 232 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 COX16Q9P0S2 106 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 SLCO1B1Q9Y6L6 691 aa10.8□□□□□ -0.68
PRPF40B-204ENST00000527253 CEP295Q9C0D2 2601 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 METTL12A8MUP2 240 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 TTC34A8MYJ7 566 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 DAB1O75553 588 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 ATP5BP06576 529 aaKnown RBP10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 PMLP29590 882 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 OXTRP30559 389 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 ACSL1P33121 698 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 GGCXP38435 758 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 DPP6P42658 865 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 GABRB2P47870 512 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 BPIFB4P59827 614 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 E2F5Q15329 346 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 C2CD6Q53TS8 623 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 ARTNQ5T4W7 220 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 SH3PXD2AQ5TCZ1 1133 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 TAF3Q5VWG9 929 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 DAB2IPQ5VWQ8 1189 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 TRNP1Q6NT89 227 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 PSAPL1Q6NUJ1 521 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 FBXL22Q6P050 247 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 ATP6V0D2Q8N8Y2 350 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 OR52K2Q8NGK3 314 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 C1orf216Q8TAB5 229 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 CEP76Q8TAP6 659 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 DNASE2BQ8WZ79 361 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 ALG14Q96F25 216 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 NPY6RQ99463 290 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 STK33Q9BYT3 514 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 VPS16Q9H269 839 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 SLCO3A1Q9UIG8 710 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 ERVW-1Q9UQF0 538 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 SNX10Q9Y5X0 201 aa10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 MAP1BP46821 2468 aaKnown RBP10.79□□□□□ -0.68
PRPF40B-204ENST00000527253 F5H5T6 163 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 F8VZ95 297 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 H0Y626 953 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 PES1O00541 588 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 SIN3BO75182 1162 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 ADCY5O95622 1261 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 MMEP08473 750 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 ACADMP11310 421 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 CHRNB2P17787 502 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 CSRP1P21291 193 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 MZF1P28698 734 aaPredicted RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 CCR1P32246 355 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 NOS2P35228 1153 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 NOVA1P51513 510 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 RNASE9P60153 205 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 BNC1Q01954 994 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 CENPCQ03188 943 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 GFPT1Q06210 699 aaPredicted RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 NME3Q13232 169 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 CDH18Q13634 790 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 AUHQ13825 339 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 HNRNPA1L2Q32P51 320 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 PLEKHG6Q3KR16 790 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 C9orf64Q5T6V5 341 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 DCAF12L1Q5VU92 463 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 CXorf57Q6NSI4 855 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 PIP4P1Q86T03 277 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 XYLT1Q86Y38 959 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 DHX40Q8IX18 779 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 RGL4Q8IZJ4 473 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 CCAR2Q8N163 923 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 TMEM35BQ8NCS4 154 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 DEFB124Q8NES8 71 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 CADM4Q8NFZ8 388 aa10.78□□□□□ -0.68
PRPF40B-204ENST00000527253 SLC20A1Q8WUM9 679 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms