RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 LRRC72A6NJI9 287 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 SIN3BO75182 1162 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 ASLP04424 464 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 CSKP41240 450 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 TBX4P57082 545 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 KRT85P78386 507 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 ARID5BQ14865 1188 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 DCAF17Q5H9S7 520 aaPredicted RBP16.72■□□□□ 0.27
PTPRU-210ENST00000527027 LCLAT1Q6UWP7 414 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 GATAD2AQ86YP4 633 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 SMYD4Q8IYR2 804 aaPredicted RBP16.72■□□□□ 0.27
PTPRU-210ENST00000527027 KDM1BQ8NB78 822 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 HJURPQ8NCD3 748 aaPredicted RBP16.72■□□□□ 0.27
PTPRU-210ENST00000527027 SLC35F5Q8WV83 523 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 SLC6A18Q96N87 628 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 DDX50Q9BQ39 737 aaKnown RBP16.72■□□□□ 0.27
PTPRU-210ENST00000527027 NEUROG2Q9H2A3 272 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 SERGEFQ9UGK8 458 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 INTS6Q9UL03 887 aaKnown RBP16.72■□□□□ 0.27
PTPRU-210ENST00000527027 PCDHGA1Q9Y5H4 931 aa16.72■□□□□ 0.27
PTPRU-210ENST00000527027 KALRNO60229 2985 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 TARSL2A2RTX5 802 aaKnown RBP16.71■□□□□ 0.27
PTPRU-210ENST00000527027 ENC1O14682 589 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 RNASEH2AO75792 299 aaKnown RBP16.71■□□□□ 0.27
PTPRU-210ENST00000527027 GABBR2O75899 941 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 LDOC1O95751 146 aaPredicted RBP16.71■□□□□ 0.27
PTPRU-210ENST00000527027 C1SP09871 688 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 CDK4P11802 303 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 JUPP14923 745 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 RGS7P49802 495 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 CST6Q15828 149 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 NADSYN1Q6IA69 706 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 PMF1Q6P1K2 205 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 NCEH1Q6PIU2 408 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 DHX40Q8IX18 779 aaKnown RBP16.71■□□□□ 0.27
PTPRU-210ENST00000527027 UBR7Q8N806 425 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 OR2T34Q8NGX1 318 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 TFAP2BQ92481 460 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 MRGPRX3Q96LB0 322 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 OMDQ99983 421 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 EBF2Q9HAK2 575 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 ADAMTS1Q9UHI8 967 aa16.71■□□□□ 0.27
PTPRU-210ENST00000527027 MUC22E2RYF6 1773 aaPredicted RBP16.71■□□□□ 0.27
PTPRU-210ENST00000527027 HELZ2Q9BYK8 2649 aaKnown RBP16.7■□□□□ 0.26
PTPRU-210ENST00000527027 A0A1W2PP55 124 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 TYW5A2RUC4 315 aaKnown RBP16.7■□□□□ 0.26
PTPRU-210ENST00000527027 PLK4O00444 970 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 MID1O15344 667 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 SLC16A3O15427 465 aaKnown RBP16.7■□□□□ 0.26
PTPRU-210ENST00000527027 ZNF202O95125 648 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 LTFP02788 710 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 WNT1P04628 370 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 ITGAVP06756 1048 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 PAEPP09466 180 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 ABCB4P21439 1286 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 TBXAS1P24557 533 aaPredicted RBP16.7■□□□□ 0.26
PTPRU-210ENST00000527027 CD38P28907 300 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 CCR5P51681 352 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 LRMPQ12912 555 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 KCNJ12Q14500 433 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 CNGA2Q16280 664 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 C9orf64Q5T6V5 341 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 MMAAQ8IVH4 418 aaKnown RBP16.7■□□□□ 0.26
PTPRU-210ENST00000527027 CCDC117Q8IWD4 279 aaPredicted RBP16.7■□□□□ 0.26
PTPRU-210ENST00000527027 CARNMT1Q8N4J0 409 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 SAP25Q8TEE9 199 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 CRELD1Q96HD1 420 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 CNDP2Q96KP4 475 aaKnown RBP16.7■□□□□ 0.26
PTPRU-210ENST00000527027 AASDHPPTQ9NRN7 309 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 FZD4Q9ULV1 537 aa16.7■□□□□ 0.26
PTPRU-210ENST00000527027 SETXQ7Z333 2677 aaKnown RBP16.69■□□□□ 0.26
PTPRU-210ENST00000527027 A0A1W2PQ27 194 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 A0A1W2PQ64 194 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 C10orf142B7Z368 130 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 PIK3R2O00459 728 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 YKT6O15498 198 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 SRPRAP08240 638 aaKnown RBP16.69■□□□□ 0.26
PTPRU-210ENST00000527027 SLC8A1P32418 973 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 HNF1BP35680 557 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 ABCG1P45844 678 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 RPS24P62847 133 aaKnown RBP16.69■□□□□ 0.26
PTPRU-210ENST00000527027 FKBP3Q00688 224 aaKnown RBP16.69■□□□□ 0.26
PTPRU-210ENST00000527027 SHBQ15464 509 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 FSCBQ5H9T9 825 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 PITRM1Q5JRX3 1037 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 TMEM270Q6UE05 265 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 CLEC4CQ8WTT0 213 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 NXPE2Q96DL1 559 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 MYEOVQ96EZ4 313 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 HSFY1Q96LI6 401 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 PRICKLE1Q96MT3 831 aaPredicted RBP16.69■□□□□ 0.26
PTPRU-210ENST00000527027 DCBLD2Q96PD2 775 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 FAM129BQ96TA1 746 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 GDF3Q9NR23 364 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 ERVW-1Q9UQF0 538 aa16.69■□□□□ 0.26
PTPRU-210ENST00000527027 TMEM131Q92545 1883 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 EDDM13A0A1B0GTR0 161 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 A0A1W2PR77 199 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 TTC34A8MYJ7 566 aa16.68■□□□□ 0.26
PTPRU-210ENST00000527027 CBX4O00257 560 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms