RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 ZCWPW1Q9H0M4 648 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 LMAN2LQ9H0V9 348 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SDCBP2Q9H190 292 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 ISCUQ9H1K1 167 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 ZNF552Q9H707 407 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SYNCQ9H7C4 482 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 RXFP1Q9HBX9 757 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 MRPL47Q9HD33 250 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 MRPL17Q9NRX2 175 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SEPT11Q9NVA2 429 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 COMMD8Q9NX08 183 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 MARCH5Q9NX47 278 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 FNIP2Q9P278 1114 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 UVRAGQ9P2Y5 699 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 MYO1AQ9UBC5 1043 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 MTRRQ9UBK8 725 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 DNAJB4Q9UDY4 337 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 AJAP1Q9UKB5 411 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 PPT2Q9UMR5 302 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 PPP2R2CQ9Y2T4 447 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 IRAK3Q9Y616 596 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SCINQ9Y6U3 715 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 COL4A6Q14031 1691 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 TMEM82A0PJX8 343 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 LINC01553A4QN01 128 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 M0QYV0 167 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 XPO1O14980 1071 aaKnown RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 KIF5CO60282 957 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 B4GALT3O60512 393 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 ITGB1P05556 798 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 MMEP08473 750 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 PLEKP08567 350 aaPredicted RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 CTSAP10619 480 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 CHRNB2P17787 502 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 MMP8P22894 467 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 CTNNB1P35222 781 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 ARHGAP25P42331 645 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 GPD2P43304 727 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 GABRB2P47870 512 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 PPP3CCP48454 512 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 RPL34P49207 117 aaKnown RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 NDUFV1P49821 464 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 GSCP56915 257 aaPredicted RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 ERVK-21P61565 698 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 RPL10AP62906 217 aaKnown RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 NOMO3P69849 1222 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 SMAD3P84022 425 aaKnown RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 GFPT1Q06210 699 aaPredicted RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 GOLGA8FQ08AF8 430 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 GOLGA8DPQ0D2H9 430 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 PDCLQ13371 301 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 PLD1Q13393 1074 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 RAB33AQ14088 237 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 ZNF268Q14587 947 aaPredicted RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 SMC1AQ14683 1233 aaKnown RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 PSMD5Q16401 504 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 PTPROQ16827 1216 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 GOLGA7BQ2TAP0 167 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 BBS9Q3SYG4 887 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 MDH1BQ5I0G3 518 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 TAF3Q5VWG9 929 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 NAA35Q5VZE5 725 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 E4F1Q66K89 784 aaPredicted RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 RAD9BQ6WBX8 426 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 CCDC81Q6ZN84 652 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 CCDC149Q6ZUS6 474 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 TOGARAM2Q6ZUX3 1019 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 ARCQ7LC44 396 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 TMEM110Q86TL2 294 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 OSTM1Q86WC4 334 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 TDHQ8IZJ6 230 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 MCOLN2Q8IZK6 566 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 SYCE1Q8N0S2 351 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 FUKQ8N0W3 1084 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 VPS52Q8N1B4 723 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 SCML4Q8N228 414 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 ARHGAP18Q8N392 663 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 OXR1Q8N573 874 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 MRPL43Q8N983 215 aaKnown RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 ZNF461Q8TAF7 563 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 LNX1Q8TBB1 728 aaPredicted RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 SLC2A14Q8TDB8 520 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 HASPINQ8TF76 798 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 HDAC7Q8WUI4 952 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 SLC20A1Q8WUM9 679 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 SLC35F5Q8WV83 523 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 RIN2Q8WYP3 895 aaPredicted RBP4.01□□□□□ -1.77
C11orf54-204ENST00000527003 RFFLQ8WZ73 363 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 IRGQQ8WZA9 623 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 TFAP2BQ92481 460 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 GOLGA1Q92805 767 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 PPP2R3CQ969Q6 453 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 C18orf8Q96DM3 657 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 TCTN2Q96GX1 697 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 PCED1BQ96HM7 432 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 PPP1R13BQ96KQ4 1090 aa4.01□□□□□ -1.77
C11orf54-204ENST00000527003 SPATA17Q96L03 361 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms