RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 SPTLC3Q9NUV7 552 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 STARD13Q9Y3M8 1113 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 SCINQ9Y6U3 715 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 EML5Q05BV3 1969 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 DOCK4Q8N1I0 1966 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 GPR179Q6PRD1 2367 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 TYW5A2RUC4 315 aaKnown RBP12.72□□□□□ -0.37
CTTN-210ENST00000525852 ADAM23O75077 832 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 ATG13O75143 517 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 LUC7L3O95232 432 aaKnown RBP12.72□□□□□ -0.37
CTTN-210ENST00000525852 KLF8O95600 359 aaPredicted RBP12.72□□□□□ -0.37
CTTN-210ENST00000525852 PSMA2P25787 234 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 CD70P32970 193 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 MRPS21P82921 87 aaKnown RBP12.72□□□□□ -0.37
CTTN-210ENST00000525852 NHLH1Q02575 133 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 C5orf22Q49AR2 442 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 RABGAP1LQ5R372 815 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 NUDT18Q6ZVK8 323 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 KIAA0907Q7Z7F0 614 aaPredicted RBP12.72□□□□□ -0.37
CTTN-210ENST00000525852 MFN1Q8IWA4 741 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 CCAR2Q8N163 923 aaKnown RBP12.72□□□□□ -0.37
CTTN-210ENST00000525852 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTTN-210ENST00000525852 ZNF513Q8N8E2 541 aaPredicted RBP12.72□□□□□ -0.37
CTTN-210ENST00000525852 TXNDC5Q8NBS9 432 aaKnown RBP12.72□□□□□ -0.37
CTTN-210ENST00000525852 CCDC26Q8TAB7 109 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 FIBINQ8TAL6 211 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 SORCS1Q8WY21 1168 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 C1orf74Q96LT6 269 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 HHIPQ96QV1 700 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 MRPL47Q9HD33 250 aaKnown RBP12.72□□□□□ -0.37
CTTN-210ENST00000525852 GGA2Q9UJY4 613 aa12.72□□□□□ -0.37
CTTN-210ENST00000525852 MUC22E2RYF6 1773 aaPredicted RBP12.71□□□□□ -0.37
CTTN-210ENST00000525852 E9PAM4 449 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 FAM72CH0Y354 149 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 SGK1O00141 431 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 CNTN5O94779 1100 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 PAPSS2O95340 614 aaPredicted RBP12.71□□□□□ -0.38
CTTN-210ENST00000525852 CDC25BP30305 580 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 PXNP49023 591 aaPredicted RBP12.71□□□□□ -0.38
CTTN-210ENST00000525852 NUMBP49757 651 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 LMAN2Q12907 356 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 CDH18Q13634 790 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 FAM72AQ5TYM5 149 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 TTC39BQ5VTQ0 682 aaPredicted RBP12.71□□□□□ -0.38
CTTN-210ENST00000525852 FAM72DQ6L9T8 149 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 SCYL2Q6P3W7 929 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 ADIPOR2Q86V24 386 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 FAM72BQ86X60 149 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 FNIP1Q8TF40 1166 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 ATOH1Q92858 354 aaPredicted RBP12.71□□□□□ -0.38
CTTN-210ENST00000525852 ERLEC1Q96DZ1 483 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 BTBD6Q96KE9 485 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 PANX2Q96RD6 677 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 NUP85Q9BW27 656 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 FBXO4Q9UKT5 387 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 MMP17Q9ULZ9 603 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 R4GN57 208 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 SDK1Q7Z5N4 2213 aa12.71□□□□□ -0.38
CTTN-210ENST00000525852 ZFHX2Q9C0A1 2572 aaPredicted RBP12.7□□□□□ -0.38
CTTN-210ENST00000525852 IGLV3-10A0A075B6K4 115 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 A0A1B0GVM2 712 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 TCAF2A6NFQ2 919 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 DRGXA6NNA5 263 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 H0Y626 953 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 SRGAP2O75044 1071 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 H2AFZP0C0S5 128 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 PABPC1P11940 636 aaKnown RBP12.7□□□□□ -0.38
CTTN-210ENST00000525852 WASP42768 502 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 SCAPQ12770 1279 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 DMC1Q14565 340 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 ARL13BQ3SXY8 428 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 FUT11Q495W5 492 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 ALFQ53S48 1182 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 DAB2IPQ5VWQ8 1189 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 HEATR6Q6AI08 1181 aaKnown RBP12.7□□□□□ -0.38
CTTN-210ENST00000525852 TMEM92Q6UXU6 159 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 H2AFVQ71UI9 128 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 CHST9Q7L1S5 443 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 SYT13Q7L8C5 426 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 PYROXD2Q8N2H3 581 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 SPC24Q8NBT2 197 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 OR52K2Q8NGK3 314 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 KCNV2Q8TDN2 545 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 NELL1Q92832 810 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 NTAN1Q96AB6 310 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 ACDQ96AP0 544 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 CIPCQ9C0C6 399 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 OSBPL2Q9H1P3 480 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 ELOVL2Q9NXB9 296 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 CACNA2D2Q9NY47 1150 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 MPP6Q9NZW5 540 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 OR12D3Q9UGF7 316 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 INTS6Q9UL03 887 aaKnown RBP12.7□□□□□ -0.38
CTTN-210ENST00000525852 ARIH1Q9Y4X5 557 aaPredicted RBP12.7□□□□□ -0.38
CTTN-210ENST00000525852 FRYLO94915 3013 aa12.7□□□□□ -0.38
CTTN-210ENST00000525852 WASH3PC4AMC7 463 aa12.69□□□□□ -0.38
CTTN-210ENST00000525852 TMEM253P0C7T8 217 aa12.69□□□□□ -0.38
CTTN-210ENST00000525852 FECHP22830 423 aa12.69□□□□□ -0.38
CTTN-210ENST00000525852 FNTBP49356 437 aa12.69□□□□□ -0.38
CTTN-210ENST00000525852 CDH4P55283 916 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms