RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 RPL4P36578 427 aaKnown RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 RAB25P57735 213 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 DLG1Q12959 904 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 TOP3AQ13472 1001 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 GLRA4Q5JXX5 417 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 FNBP1LQ5T0N5 605 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 IRGCQ6NXR0 463 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 MARK2Q7KZI7 788 aaKnown RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 AP1S3Q96PC3 154 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 RHBGQ9H310 441 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 MARK1Q9P0L2 795 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 PLXNC1O60486 1568 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 KIAA0391O15091 583 aaKnown RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 FARP2O94887 1054 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 LRG1P02750 347 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 KLRC1P26715 233 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 RAPSNQ13702 412 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 SPIDRQ14159 915 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 RFX4Q33E94 735 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 FAM131AQ6UXB0 335 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 ING5Q8WYH8 240 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 HTRA1Q92743 480 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 MTG1Q9BT17 334 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 TMEM168Q9H0V1 697 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 OSBPL3Q9H4L5 887 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 EXO5Q9H790 373 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 UBP1Q9NZI7 540 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 IKZF3Q9UKT9 509 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 L1RE1Q9UN81 338 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 A0A0G2JPF8 293 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 HNRNPCL3B7ZW38 293 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 TEX46H3BTG2 121 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 KMOO15229 486 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 TSPAN3O60637 253 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 HNRNPCL4P0DMR1 293 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 GJA1P17302 382 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 CRATP43155 626 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 COPZ1P61923 177 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 CDKL1Q00532 357 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 BROXQ5VW32 411 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 OXNAD1Q96HP4 312 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 ZNF354BQ96LW1 612 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 PLEKHF1Q96S99 279 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 PCDH12Q9NPG4 1184 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 EDC4Q6P2E9 1401 aaKnown RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 ARHGEF33A8MVX0 844 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 WRBO00258 174 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 PLOD2O00469 737 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 FCHO1O14526 889 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 CRTAMO95727 393 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 DBIP07108 87 aaKnown RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 NR3C2P08235 984 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 PCSK1P29120 753 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 PTPN5P54829 565 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 BNC1Q01954 994 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 ZFP1Q6P2D0 407 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 TXNDC11Q6PKC3 985 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 KBTBD8Q8NFY9 601 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 OR8H1Q8NGG4 311 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 ZNF184Q99676 751 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 REEP2Q9BRK0 252 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 TTYH1Q9H313 450 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 TDRD3Q9H7E2 651 aaKnown RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 RASSF1Q9NS23 344 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 LOC102724428A0A0B4J2F2 783 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 TOP3BO95985 862 aaKnown RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 SIK1P57059 783 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 MAPK7Q13164 816 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 ORC1Q13415 861 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 ZFP69Q49AA0 526 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 CBWD3Q5JTY5 395 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 CBWD5Q5RIA9 395 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 N4BP2L1Q5TBK1 243 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 GPR107Q5VW38 600 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 IQSEC1Q6DN90 963 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 SNX32Q86XE0 403 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 LSM14AQ8ND56 463 aaKnown RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 ANKS1AQ92625 1134 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 NUDT12Q9BQG2 462 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 TOR3AQ9H497 397 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 INSRP06213 1382 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 AFF2P51816 1311 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 ERVK-7P63135 1459 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 ZBTB11O95625 1053 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-202ENST00000525284 PRKAG1P54619 331 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 MPP3Q13368 585 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 CARTPTQ16568 116 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 OFCC1Q8IZS5 231 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 REXO5Q96IC2 774 aaKnown RBP13.93□□□□□ -0.18
LRRK1-202ENST00000525284 GPATCH2LQ9NWQ4 482 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 DDX20Q9UHI6 824 aaKnown RBP13.93□□□□□ -0.18
LRRK1-202ENST00000525284 ARHGEF5Q12774 1597 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 CES2O00748 559 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 OXCT1P55809 520 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 FAM182BQ5T319 152 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 MIB1Q86YT6 1006 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 STRBPQ96SI9 672 aaKnown RBP13.93□□□□□ -0.18
LRRK1-202ENST00000525284 NLNQ9BYT8 704 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 THAP2Q9H0W7 228 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms