RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 ADAT2Q7Z6V5 191 aaKnown RBP17.79■□□□□ 0.44
TSKU-202ENST00000525167 CCDC117Q8IWD4 279 aaPredicted RBP17.79■□□□□ 0.44
TSKU-202ENST00000525167 SKA1Q96BD8 255 aa17.79■□□□□ 0.44
TSKU-202ENST00000525167 PRICKLE1Q96MT3 831 aaPredicted RBP17.79■□□□□ 0.44
TSKU-202ENST00000525167 CEP63Q96MT8 703 aa17.79■□□□□ 0.44
TSKU-202ENST00000525167 TRIM62Q9BVG3 475 aa17.79■□□□□ 0.44
TSKU-202ENST00000525167 ACE2Q9BYF1 805 aaPredicted RBP17.79■□□□□ 0.44
TSKU-202ENST00000525167 SCUBE2Q9NQ36 999 aa17.79■□□□□ 0.44
TSKU-202ENST00000525167 ADAMTS1Q9UHI8 967 aa17.79■□□□□ 0.44
TSKU-202ENST00000525167 FZD4Q9ULV1 537 aa17.79■□□□□ 0.44
TSKU-202ENST00000525167 TLR6Q9Y2C9 796 aa17.79■□□□□ 0.44
TSKU-202ENST00000525167 PCDHB4Q9Y5E5 795 aa17.79■□□□□ 0.44
TSKU-202ENST00000525167 ADAMTS20P59510 1910 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 A0A1W2PPC4 97 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 TARSL2A2RTX5 802 aaKnown RBP17.78■□□□□ 0.44
TSKU-202ENST00000525167 E9PAM4 449 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 H0Y8X5 98 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 PSMA7O14818 248 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 SRPRAP08240 638 aaKnown RBP17.78■□□□□ 0.44
TSKU-202ENST00000525167 PPP1R2P41236 205 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 CSKP41240 450 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 PMS1P54277 932 aaKnown RBP17.78■□□□□ 0.44
TSKU-202ENST00000525167 STIM1Q13586 685 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 CDH18Q13634 790 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 SMAD1Q15797 465 aaKnown RBP17.78■□□□□ 0.44
TSKU-202ENST00000525167 NADSYN1Q6IA69 706 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 PPM1KQ8N3J5 372 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 MDM1Q8TC05 714 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 FCRL2Q96LA5 508 aaPredicted RBP17.78■□□□□ 0.44
TSKU-202ENST00000525167 FBXL12Q9NXK8 326 aa17.78■□□□□ 0.44
TSKU-202ENST00000525167 HOOK1Q9UJC3 728 aaKnown RBP17.78■□□□□ 0.44
TSKU-202ENST00000525167 ITIH6Q6UXX5 1313 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 NUMA1Q14980 2115 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 GOLGA6L7A0A1B0GV03 622 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 LRRC72A6NJI9 287 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 SIN3BO75182 1162 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 RPL34P49207 117 aaKnown RBP17.77■□□□□ 0.44
TSKU-202ENST00000525167 C21orf59P57076 290 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 GCNT1Q02742 428 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 CST6Q15828 149 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 MEA1Q16626 185 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 OR2T34Q8NGX1 318 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 DQX1Q8TE96 717 aaKnown RBP17.77■□□□□ 0.44
TSKU-202ENST00000525167 GANCQ8TET4 914 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 SMARCE1Q969G3 411 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 SLC39A13Q96H72 371 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 MRGPRX3Q96LB0 322 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 ZSWIM1Q9BR11 485 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 STIM2Q9P246 746 aa17.77■□□□□ 0.44
TSKU-202ENST00000525167 INTS6Q9UL03 887 aaKnown RBP17.77■□□□□ 0.44
TSKU-202ENST00000525167 COL5A1P20908 1838 aaPredicted RBP17.77■□□□□ 0.43
TSKU-202ENST00000525167 A0A1B0GTQ1 180 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 TRIM49BA6NDI0 452 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 C10orf142B7Z368 130 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 YKT6O15498 198 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 MOCS3O95396 460 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 CDK4P11802 303 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 BRD2P25440 801 aaKnown RBP17.76■□□□□ 0.43
TSKU-202ENST00000525167 ACADSBP45954 432 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 CCR5P51681 352 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 GALCP54803 685 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 RPS24P62847 133 aaKnown RBP17.76■□□□□ 0.43
TSKU-202ENST00000525167 MS4A13Q5J8X5 152 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 C9orf64Q5T6V5 341 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 FOXR2Q6PJQ5 311 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 PDZD3Q86UT5 571 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 PDCD7Q8N8D1 485 aaKnown RBP17.76■□□□□ 0.43
TSKU-202ENST00000525167 CLEC4CQ8WTT0 213 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 DHTKD1Q96HY7 919 aaPredicted RBP17.76■□□□□ 0.43
TSKU-202ENST00000525167 GDPD2Q9HCC8 539 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 FTSJ1Q9UET6 329 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 ERVW-1Q9UQF0 538 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 PCDHGA1Q9Y5H4 931 aa17.76■□□□□ 0.43
TSKU-202ENST00000525167 TMEM131Q92545 1883 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 EDDM13A0A1B0GTR0 161 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 GOLGA6L4A6NEF3 574 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 GOLGA8CPA6NN73 597 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 RNF225M0QZC1 329 aaPredicted RBP17.75■□□□□ 0.43
TSKU-202ENST00000525167 PIK3R2O00459 728 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 MID1O15344 667 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 LUC7L3O95232 432 aaKnown RBP17.75■□□□□ 0.43
TSKU-202ENST00000525167 ADH1BP00325 375 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 FYNP06241 537 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 CAMK2BQ13554 666 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 SLC12A1Q13621 1099 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 COL28A1Q2UY09 1125 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 PITRM1Q5JRX3 1037 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 KCNT1Q5JUK3 1230 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 NCEH1Q6PIU2 408 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 C19orf48Q6RUI8 117 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 LAYNQ6UX15 382 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 DHX40Q8IX18 779 aaKnown RBP17.75■□□□□ 0.43
TSKU-202ENST00000525167 CARNMT1Q8N4J0 409 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 LMO3Q8TAP4 145 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 STK32AQ8WU08 396 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 TIGD1Q96MW7 591 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 ELF4Q99607 663 aaPredicted RBP17.75■□□□□ 0.43
TSKU-202ENST00000525167 OMDQ99983 421 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 MIS12Q9H081 205 aa17.75■□□□□ 0.43
TSKU-202ENST00000525167 NUCKS1Q9H1E3 243 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms