RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ZSCAN5CA6NGD5 496 aaPredicted RBP17.44■□□□□ 0.38
BEST1-203ENST00000524877 DIAPH2O60879 1101 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 SNAI1O95863 264 aaPredicted RBP17.44■□□□□ 0.38
BEST1-203ENST00000524877 C8AP07357 584 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 OR56A5P0C7T3 313 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 EFTUD2Q15029 972 aaKnown RBP eCLIP17.44■□□□□ 0.38
BEST1-203ENST00000524877 TPGS2Q68CL5 300 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 GPR88Q9GZN0 384 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 ATP13A3Q9H7F0 1226 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 A0A1W2PQH9 124 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 SIGLEC16A6NMB1 481 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 SCAMP3O14828 347 aaKnown RBP17.44■□□□□ 0.38
BEST1-203ENST00000524877 HSPA9P38646 679 aaKnown RBP17.44■□□□□ 0.38
BEST1-203ENST00000524877 POU4F1Q01851 419 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 VAT1Q99536 393 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 TBL1YQ9BQ87 522 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 TEX12Q9BXU0 123 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 SMARCAL1Q9NZC9 954 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 RNF112Q9ULX5 631 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 MAGEB16A2A368 324 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 ZNF839A8K0R7 811 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 CCZ1BP86790 482 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 CCZ1P86791 482 aaPredicted RBP17.44■□□□□ 0.38
BEST1-203ENST00000524877 TAF10Q12962 218 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 PPWD1Q96BP3 646 aaKnown RBP17.44■□□□□ 0.38
BEST1-203ENST00000524877 C10orf88Q9H8K7 445 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 ZFP14Q9HCL3 533 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 FAM153AQ9UHL3 310 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 IL1BP01584 269 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 SLC20A2Q08357 652 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 RBM43Q6ZSC3 357 aaKnown RBP17.44■□□□□ 0.38
BEST1-203ENST00000524877 KCNV2Q8TDN2 545 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 ZMYM5Q9UJ78 669 aa17.44■□□□□ 0.38
BEST1-203ENST00000524877 PDE2AO00408 941 aaPredicted RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 CLASP2O75122 1294 aaKnown RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 SPAG7O75391 227 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 TM4SF4P48230 202 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 MAPRE2Q15555 327 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 AGAP9Q5VTM2 703 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 KCNT2Q6UVM3 1135 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 FAM228AQ86W67 206 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 GSPT2Q8IYD1 628 aaKnown RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 ING5Q8WYH8 240 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 UPF3AQ9H1J1 476 aaKnown RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 PPARGC1AQ9UBK2 798 aaKnown RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 C4AP0C0L4 1744 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 TRDMT1O14717 391 aaKnown RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 SNRPAP09012 282 aaKnown RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 C17orf99Q6UX52 265 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 C11orf96Q7Z7L8 435 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 C4orf32Q8N8J7 132 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 COG1Q8WTW3 980 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 HTR3CQ8WXA8 447 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 TMEM159Q96B96 161 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 NAT9Q9BTE0 207 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 TRABDQ9H4I3 376 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 PCMTD2Q9NV79 361 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 NDRG2Q9UN36 371 aaKnown RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 TKTP29401 623 aaKnown RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 JAG1P78504 1218 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 KDSRQ06136 332 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 GRSF1Q12849 480 aaKnown RBP eCLIP17.43■□□□□ 0.38
BEST1-203ENST00000524877 ATAD1Q8NBU5 361 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 LEMD2Q8NC56 503 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 IL23AQ9NPF7 189 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 MRPL40Q9NQ50 206 aaKnown RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 PSD3Q9NYI0 1048 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 DCTN3O75935 186 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 MIPP30301 263 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 TRPC1P48995 793 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 ARSHQ5FYA8 562 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 LRRC1Q9BTT6 524 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 TLR9Q9NR96 1032 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 BAIAP3O94812 1187 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 CDH17Q12864 832 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 PPP1R26Q5T8A7 1209 aaPredicted RBP17.43■□□□□ 0.38
BEST1-203ENST00000524877 NAT16Q8N8M0 369 aa17.43■□□□□ 0.38
BEST1-203ENST00000524877 HTR1BP28222 390 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 BRMS1LQ5PSV4 323 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 PRSS55Q6UWB4 352 aaPredicted RBP17.42■□□□□ 0.38
BEST1-203ENST00000524877 FAM124BQ9H5Z6 455 aaPredicted RBP17.42■□□□□ 0.38
BEST1-203ENST00000524877 POLE3Q9NRF9 147 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 IARS2Q9NSE4 1012 aaKnown RBP17.42■□□□□ 0.38
BEST1-203ENST00000524877 GMIPQ9P107 970 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 TSPAN9O75954 239 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 ESRRAP11474 423 aaPredicted RBP17.42■□□□□ 0.38
BEST1-203ENST00000524877 KCNJ1P48048 391 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 ZNF143P52747 638 aaPredicted RBP17.42■□□□□ 0.38
BEST1-203ENST00000524877 FAM43BQ6ZT52 329 aaPredicted RBP17.42■□□□□ 0.38
BEST1-203ENST00000524877 GLIS3Q8NEA6 775 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 WDR24Q96S15 920 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 ARIH2O95376 493 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 ZNF7P17097 686 aaPredicted RBP17.42■□□□□ 0.38
BEST1-203ENST00000524877 CCDC138Q96M89 665 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 PRKD2Q9BZL6 878 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 SCHIP1Q9P0W5 487 aaPredicted RBP17.42■□□□□ 0.38
BEST1-203ENST00000524877 ASB3Q9Y575 518 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 GLI1P08151 1106 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 CYP2A7P20853 494 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 FSHRP23945 695 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms