RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 MAPRE1Q15691 268 aaKnown RBP12.08□□□□□ -0.48
PTPRK-216ENST00000524481 TRIM71Q2Q1W2 868 aaKnown RBP12.08□□□□□ -0.48
PTPRK-216ENST00000524481 TRIM60Q495X7 471 aa12.08□□□□□ -0.48
PTPRK-216ENST00000524481 C16orf46Q6P387 395 aa12.08□□□□□ -0.48
PTPRK-216ENST00000524481 RNF19BQ6ZMZ0 732 aa12.08□□□□□ -0.48
PTPRK-216ENST00000524481 TRABD2AQ86V40 505 aa12.08□□□□□ -0.48
PTPRK-216ENST00000524481 SLAIN1Q8ND83 568 aa12.08□□□□□ -0.48
PTPRK-216ENST00000524481 KCTD13Q8WZ19 329 aa12.08□□□□□ -0.48
PTPRK-216ENST00000524481 ZNF669Q96BR6 464 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-216ENST00000524481 STAMBPL1Q96FJ0 436 aa12.08□□□□□ -0.48
PTPRK-216ENST00000524481 SPATA13Q96N96 652 aa12.08□□□□□ -0.48
PTPRK-216ENST00000524481 RPRD1AQ96P16 312 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-216ENST00000524481 TMEM39AQ9NV64 488 aa12.08□□□□□ -0.48
PTPRK-216ENST00000524481 TMEM51Q9NW97 253 aa12.08□□□□□ -0.48
PTPRK-216ENST00000524481 BCLAF3A2AJT9 711 aaKnown RBP12.07□□□□□ -0.48
PTPRK-216ENST00000524481 A6NNZ2 444 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 TSPAN3O60637 253 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 GCAP28676 217 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 EML3Q32P44 896 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 TUBB8Q3ZCM7 444 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 RFWD3Q6PCD5 774 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 RSPO2Q6UXX9 243 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-216ENST00000524481 UNC5AQ6ZN44 842 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 COLGALT2Q8IYK4 626 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 NUP93Q8N1F7 819 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 FAM136AQ96C01 138 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 MECRQ9BV79 373 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 VPS11Q9H270 941 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 SMYD2Q9NRG4 433 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 CFAP69A5D8W1 941 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 F9P00740 461 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 NR2C2P49116 596 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 GSCP56915 257 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-216ENST00000524481 WDR4P57081 412 aaKnown RBP12.07□□□□□ -0.48
PTPRK-216ENST00000524481 KCNJ11Q14654 390 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 TCTN1Q2MV58 587 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 KLHL38Q2WGJ6 581 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 FUT10Q6P4F1 479 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 ZNF598Q86UK7 904 aaKnown RBP12.07□□□□□ -0.48
PTPRK-216ENST00000524481 ATPAF2Q8N5M1 289 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 ZNF784Q8NCA9 323 aaPredicted RBP12.07□□□□□ -0.48
PTPRK-216ENST00000524481 AGR3Q8TD06 166 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 ATXN2LQ8WWM7 1075 aaKnown RBP12.07□□□□□ -0.48
PTPRK-216ENST00000524481 CRISPLD1Q9H336 500 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 CCSER2Q9H7U1 834 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 CYP4F11Q9HBI6 524 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 TRPC7Q9HCX4 862 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 ABCC13Q9NSE7 274 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 SYBUQ9NX95 663 aa12.07□□□□□ -0.48
PTPRK-216ENST00000524481 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-216ENST00000524481 HHLA1C9JL84 531 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 EOMESO95936 686 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 CCL5P13501 91 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 TAZQ16635 292 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 HSP90AA5PQ58FG0 334 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 MAP3K21Q5TCX8 1036 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 ZNF280DQ6N043 979 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 NDUFAF2Q8N183 169 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 ARMC2Q8NEN0 867 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 MAML1Q92585 1016 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 MFSD3Q96ES6 412 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 NSRP1Q9H0G5 558 aaKnown RBP12.06□□□□□ -0.48
PTPRK-216ENST00000524481 RBM22Q9NW64 420 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTPRK-216ENST00000524481 ZFATQ9P243 1243 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 KANSL3Q9P2N6 904 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 SIP14410 1827 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 SCN10AQ9Y5Y9 1956 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 A0A0G2JND7 137 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 COPEO14579 308 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 BNIP3LO60238 219 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 DRD4P21917 467 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 YWHAQP27348 245 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 FOXN2P32314 431 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 TBX4P57082 545 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 ZBTB17Q13105 803 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 SCD5Q86SK9 330 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 SERAC1Q96JX3 654 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 CHRAC1Q9NRG0 131 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 GKN1Q9NS71 199 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 TMEM161AQ9NX61 479 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 IQANK1A0A1B0GTG1 560 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 CCL22O00626 93 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 CHADO15335 359 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 PIRTP0C851 137 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 NFE2Q16621 373 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-216ENST00000524481 SPDYCQ5MJ68 293 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 IL31Q6EBC2 164 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 FAM171BQ6P995 826 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 ZCCHC23Q6ZST2 131 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 CHSY1Q86X52 802 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 PDCD6IPQ8WUM4 868 aaKnown RBP12.06□□□□□ -0.48
PTPRK-216ENST00000524481 ZNF778Q96MU6 729 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 LBHD1Q9BQE6 289 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-216ENST00000524481 FRMD8P1Q9BZ68 369 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-216ENST00000524481 FOXP3Q9BZS1 431 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 ACSS3Q9H6R3 686 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 NPHS2Q9NP85 383 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 MARCH2Q9P0N8 246 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 TEX264Q9Y6I9 313 aa12.06□□□□□ -0.48
PTPRK-216ENST00000524481 SDR42E2A6NKP2 422 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms