RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 EEF1B2P24534 225 aaKnown RBP13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 CNTFP26441 200 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 CD151P48509 253 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 SERPINB4P48594 390 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 LILRA4P59901 499 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 POU4F1Q01851 419 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 TAF5Q15542 800 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 ART4Q93070 314 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 NSL1Q96IY1 281 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 CDK5RAP1Q96SZ6 601 aaKnown RBP13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 HAO1Q9UJM8 370 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 DNAL1Q4LDG9 190 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 NUP93Q8N1F7 819 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 VAT1Q99536 393 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 HAUS8Q9BT25 410 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 RASSF10A6NK89 507 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 CA12O43570 354 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 BUD23O43709 281 aaKnown RBP13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 MT-CO1P00395 513 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 KCNA4P22459 653 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 ADCK2Q7Z695 626 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 MREGQ8N565 214 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 SNX27Q96L92 541 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 MRPL1Q9BYD6 325 aaKnown RBP13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 IL1RL2Q9HB29 575 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 MRPL40Q9NQ50 206 aaKnown RBP13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 A0A096LPK6 155 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 MAGEB16A2A368 324 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 SOAT2O75908 522 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 TOMM70O94826 608 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 UBOX5O94941 541 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 TRIM16O95361 564 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 LRRC36Q1X8D7 754 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 CMTM5Q96DZ9 223 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 ADGRE3Q9BY15 652 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 TM9SF1O15321 606 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 CHADO15335 359 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 ADCY6O43306 1168 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 DAB1O75553 588 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 TMCC1O94876 653 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 MMP13P45452 471 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 NPY2RP49146 381 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 SNX31Q8N9S9 440 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 CLPBQ9H078 707 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 PKD2L2Q9NZM6 624 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 RNF112Q9ULX5 631 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 CCDC88AQ3V6T2 1871 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 MYH14Q7Z406 1995 aaKnown RBP13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 ERI2A8K979 691 aaKnown RBP13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 CYP1A1P04798 512 aaPredicted RBP13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 ITGALP20701 1170 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 HDAC4P56524 1084 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 GBE1Q04446 702 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 SLC24A5Q71RS6 500 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 PSTKQ8IV42 348 aaKnown RBP13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 LRRC43Q8N309 656 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 CCDC138Q96M89 665 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 TRMT13Q9NUP7 481 aaKnown RBP13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 WWOXQ9NZC7 414 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 UBA2Q9UBT2 640 aaPredicted RBP13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 PCDHGC3Q9UN70 934 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 AURKCQ9UQB9 309 aa13.37□□□□□ -0.27
PCDHGB1-201ENST00000523390 TRDMT1O14717 391 aaKnown RBP13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 MSI1O43347 362 aaKnown RBP13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 AVILO75366 819 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 SERPIND1P05546 499 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 LMO2P25791 158 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 OR1D2P34982 312 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 C16orf46Q6P387 395 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 ZCCHC23Q6ZST2 131 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 TPGS1Q6ZTW0 290 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 MTDHQ86UE4 582 aaKnown RBP13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 FBXL18Q96ME1 805 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 TBL1YQ9BQ87 522 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 HIPK3Q9H422 1215 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 CACNG4Q9UBN1 327 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 HMGXB4Q9UGU5 601 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 LGR5O75473 907 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 CYP2C18P33260 490 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 ZNF135P52742 658 aaPredicted RBP13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 RABGGTBP53611 331 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 TTLL9Q3SXZ7 439 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 SLC25A52Q3SY17 297 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 AARS2Q5JTZ9 985 aaKnown RBP13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 HECTD3Q5T447 861 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 UBR2Q8IWV8 1755 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 LRRC39Q96DD0 335 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 APOPT1Q96IL0 206 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 LPIN3Q9BQK8 851 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 MPP6Q9NZW5 540 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 DDX20Q9UHI6 824 aaKnown RBP13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 SLC25A13Q9UJS0 675 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 PHGDHO43175 533 aaKnown RBP13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 CD48P09326 243 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 ADRA1BP35368 520 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 PSMD5Q16401 504 aa13.36□□□□□ -0.27
PCDHGB1-201ENST00000523390 TTC27Q6P3X3 843 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms