RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 CHSY1Q86X52 802 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 DHX40Q8IX18 779 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 MLKLQ8NB16 471 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 CADM4Q8NFZ8 388 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 FIBINQ8TAL6 211 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 SETD7Q8WTS6 366 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 STK32AQ8WU08 396 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 AZIN2Q96A70 460 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 PPP1R13BQ96KQ4 1090 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 PRICKLE1Q96MT3 831 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 PDCL3Q9H2J4 239 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 TMEM245Q9H330 911 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 THAP9Q9H5L6 903 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 C6orf106Q9H6K1 298 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 SYNCQ9H7C4 482 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 POPDC2Q9HBU9 364 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 APEX2Q9UBZ4 518 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 TJP2Q9UDY2 1190 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 SLC12A6Q9UHW9 1150 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 DNAJC12Q9UKB3 198 aa10.61□□□□□ -0.71
CTNNA1-235ENST00000522730 CEP192Q8TEP8 1941 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 USP24Q9UPU5 2620 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 KMT2BQ9UMN6 2715 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 KNL1Q8NG31 2342 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 A0A1B0GVT2 93 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 BECN2A8MW95 431 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 TTC34A8MYJ7 566 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 C1QTNF9BB2RNN3 333 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 KCNK3O14649 394 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 HYAL3O43820 417 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 MOCS3O95396 460 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 C1QTNF9P0C862 333 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 PNMA6AP0CW24 399 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 CD59P13987 128 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 PRKCSHP14314 528 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 TACR2P21452 398 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 CSNK1EP49674 416 aaKnown RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 RNASE9P60153 205 aaKnown RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 SHC2P98077 582 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 CDK17Q00537 523 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 PTK2Q05397 1052 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 NME3Q13232 169 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 PDCLQ13371 301 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 PITRM1Q5JRX3 1037 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 MPP7Q5T2T1 576 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 RNF219Q5W0B1 726 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 KIAA0907Q7Z7F0 614 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 TMEM110Q86TL2 294 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 CIR1Q86X95 450 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 IRF2BP1Q8IU81 584 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 DEFB106AQ8N104 65 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 WDTC1Q8N5D0 677 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 ATP6V0D2Q8N8Y2 350 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 DNASE2BQ8WZ79 361 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 TTC17Q96AE7 1141 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 SLC39A13Q96H72 371 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 RPL10LQ96L21 214 aaKnown RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 FAM81BQ96LP2 452 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 TRIM62Q9BVG3 475 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 SCNM1Q9BWG6 230 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 BTBD1Q9H0C5 482 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 GAREM1Q9H706 876 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 IL21RQ9HBE5 538 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 PLCB1Q9NQ66 1216 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 DDIT4Q9NX09 232 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 KIAA1522Q9P206 1035 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 SLCO3A1Q9UIG8 710 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 ERVW-1Q9UQF0 538 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 NCKAP1Q9Y2A7 1128 aa10.6□□□□□ -0.71
CTNNA1-235ENST00000522730 CHD6Q8TD26 2715 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 GOLGA8CPA6NN73 597 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 F5H5T6 163 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 FOXN3O00409 490 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 RNASEH1O60930 286 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 SIN3BO75182 1162 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 LUC7L3O95232 432 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 SEMA4FO95754 770 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 ABCB4P21439 1286 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 RDXP35241 583 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 RPL34P49207 117 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 ECT2LQ008S8 904 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 RAPGEF1Q13905 1077 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 TRIP6Q15654 476 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 KLHL40Q2TBA0 621 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 SKOR2Q2VWA4 1001 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 HLA-BQ31612 363 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 EFHC1Q5JVL4 640 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 ZNF776Q68DI1 518 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 LRSAM1Q6UWE0 723 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 PIP4P1Q86T03 277 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 SLC47A2Q86VL8 602 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 MMAAQ8IVH4 418 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 APCDD1Q8J025 514 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 CHCHD4Q8N4Q1 142 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 PNPLA1Q8N8W4 532 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 ZNF557Q8N988 423 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 C1orf131Q8NDD1 294 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 BTN2A3PQ96KV6 586 aa10.59□□□□□ -0.71
CTNNA1-235ENST00000522730 NOX5Q96PH1 765 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms