RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 RHOT1Q8IXI2 618 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 IFT20Q8IY31 132 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 KATNAL2Q8IYT4 538 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 CMTM8Q8IZV2 173 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 CCDC33Q8N5R6 958 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 DEFB119Q8N690 84 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 MAB21L3Q8N8X9 362 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 CCDC26Q8TAB7 109 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 RIN3Q8TB24 985 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 ALG3Q92685 438 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 SLCO2A1Q92959 643 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 EXOC4Q96A65 974 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 C11orf70Q9BRQ4 267 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 ELOVL4Q9GZR5 314 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 GDF3Q9NR23 364 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 HOMER3Q9NSC5 361 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 TUBGCP4Q9UGJ1 667 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 PACSIN2Q9UNF0 486 aaPredicted RBP11.3□□□□□ -0.6
MRPS28-208ENST00000521605 EFR3BQ9Y2G0 817 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 ASB3Q9Y575 518 aa11.3□□□□□ -0.6
MRPS28-208ENST00000521605 FAM187AA6NFU0 413 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 KPNA7A9QM74 516 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 UPK3BL1B0FP48 263 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 UPK3BL2E5RIL1 263 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 KRIT1O00522 736 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 TNFRSF10BO14763 440 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 C1QL1O75973 258 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 RHOXF2BP0C7M4 288 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 FTH1P19P0C7X4 201 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 WARSP23381 471 aaKnown RBP11.29□□□□□ -0.6
MRPS28-208ENST00000521605 ITPKAP23677 461 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 CDC25CP30307 473 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 CHRNA3P32297 505 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 GPD2P43304 727 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 FNTAP49354 379 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 AARSP49588 968 aaKnown RBP eCLIP11.29□□□□□ -0.6
MRPS28-208ENST00000521605 NDST1P52848 882 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 C2orf54Q08AI8 447 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 GPR17Q13304 367 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 VEPH1Q14D04 833 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 TRIP6Q15654 476 aaKnown RBP11.29□□□□□ -0.6
MRPS28-208ENST00000521605 LONRF2Q1L5Z9 754 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 LYSMD4Q5XG99 296 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 SLC23A3Q6PIS1 610 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 SCARA5Q6ZMJ2 495 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 TMEM86AQ8N2M4 240 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 CPA6Q8N4T0 437 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 MINDY1Q8N5J2 469 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 C1orf131Q8NDD1 294 aaKnown RBP11.29□□□□□ -0.6
MRPS28-208ENST00000521605 EXD1Q8NHP7 514 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 GIPC2Q8TF65 315 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 USP13Q92995 863 aaPredicted RBP11.29□□□□□ -0.6
MRPS28-208ENST00000521605 C18orf8Q96DM3 657 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 MS4A14Q96JA4 679 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 SPACA7Q96KW9 195 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 PSMB7Q99436 277 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 RHOXF2Q9BQY4 288 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 GOLPH3Q9H4A6 298 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 ECT2Q9H8V3 914 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 SCUBE2Q9NQ36 999 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 ZNF446Q9NWS9 450 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 OGFRQ9NZT2 677 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 PCYOX1Q9UHG3 505 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 PCDHB9Q9Y5E1 797 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 PCNX2A6NKB5 2137 aa11.29□□□□□ -0.6
MRPS28-208ENST00000521605 KALRNO60229 2985 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 TNRC6BQ9UPQ9 1833 aaKnown RBP11.28□□□□□ -0.6
MRPS28-208ENST00000521605 SART1O43290 800 aaKnown RBP11.28□□□□□ -0.6
MRPS28-208ENST00000521605 SH3BP5O60239 455 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 OAZ2O95190 189 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 FGGP02679 453 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 ERBB2P04626 1255 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 CD59P13987 128 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 PLA2G2AP14555 144 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 CD19P15391 556 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 WEE1P30291 646 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 CETN2P41208 172 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 CDH8P55286 799 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 PDCLQ13371 301 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 SOWAHAQ2M3V2 549 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 MGAT5BQ3V5L5 792 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 PTPN20Q4JDL3 420 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 TXNDC8Q6A555 127 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 DENND1BQ6P3S1 775 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 DSTYKQ6XUX3 929 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 HDXQ7Z353 690 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 TMEM110Q86TL2 294 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 VSIG1Q86XK7 387 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 SLC13A5Q86YT5 568 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-208ENST00000521605 IPO4Q8TEX9 1081 aaKnown RBP11.28□□□□□ -0.6
MRPS28-208ENST00000521605 AENQ8WTP8 325 aaKnown RBP11.28□□□□□ -0.6
MRPS28-208ENST00000521605 ADAMTS14Q8WXS8 1223 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 CAVIN3Q969G5 261 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 ELMO3Q96BJ8 720 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 TNIP3Q96KP6 325 aa11.28□□□□□ -0.6
MRPS28-208ENST00000521605 TWNKQ96RR1 684 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms