RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 SIX2Q9NPC8 291 aa21.24■□□□□ 0.99
SNHG6-203ENST00000520944 ASNSD1Q9NWL6 643 aa21.24■□□□□ 0.99
SNHG6-203ENST00000520944 KIAA1522Q9P206 1035 aaPredicted RBP21.24■□□□□ 0.99
SNHG6-203ENST00000520944 XPO7Q9UIA9 1087 aaKnown RBP21.24■□□□□ 0.99
SNHG6-203ENST00000520944 SYNJ2BP-COX16A0A087WUM0 186 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 KCNU1A8MYU2 1149 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 UPK3BL1B0FP48 263 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 UPK3BL2E5RIL1 263 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 F5H5T6 163 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 LUC7L3O95232 432 aaKnown RBP21.23■□□□□ 0.99
SNHG6-203ENST00000520944 IGLV3-25P01717 112 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 CCR1P32246 355 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 ANP32AP39687 249 aaKnown RBP21.23■□□□□ 0.99
SNHG6-203ENST00000520944 SEMA3BQ13214 749 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 SLC47A2Q86VL8 602 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 DEFB106AQ8N104 65 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 SLC2A13Q96QE2 648 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 DDIT4Q9NX09 232 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 COX16Q9P0S2 106 aa21.23■□□□□ 0.99
SNHG6-203ENST00000520944 CHD8Q9HCK8 2581 aa21.22■□□□□ 0.99
SNHG6-203ENST00000520944 RNASEH1O60930 286 aaKnown RBP21.22■□□□□ 0.99
SNHG6-203ENST00000520944 GRAP2O75791 330 aa21.22■□□□□ 0.99
SNHG6-203ENST00000520944 CLCN1P35523 988 aa21.22■□□□□ 0.99
SNHG6-203ENST00000520944 RPS14P62263 151 aaKnown RBP21.22■□□□□ 0.99
SNHG6-203ENST00000520944 RAPGEF1Q13905 1077 aa21.22■□□□□ 0.99
SNHG6-203ENST00000520944 TTC31Q49AM3 519 aaPredicted RBP21.22■□□□□ 0.99
SNHG6-203ENST00000520944 FSCBQ5H9T9 825 aa21.22■□□□□ 0.99
SNHG6-203ENST00000520944 CT47A1Q5JQC4 288 aaPredicted RBP21.22■□□□□ 0.99
SNHG6-203ENST00000520944 PITRM1Q5JRX3 1037 aa21.22■□□□□ 0.99
SNHG6-203ENST00000520944 RNF219Q5W0B1 726 aaPredicted RBP21.22■□□□□ 0.99
SNHG6-203ENST00000520944 ZNF776Q68DI1 518 aaPredicted RBP21.22■□□□□ 0.99
SNHG6-203ENST00000520944 MMS22LQ6ZRQ5 1243 aa21.22■□□□□ 0.99
SNHG6-203ENST00000520944 ZCCHC9Q8N567 271 aaKnown RBP21.22■□□□□ 0.99
SNHG6-203ENST00000520944 KDM1BQ8NB78 822 aa21.22■□□□□ 0.99
SNHG6-203ENST00000520944 C1orf131Q8NDD1 294 aaKnown RBP21.22■□□□□ 0.99
SNHG6-203ENST00000520944 BTBD1Q9H0C5 482 aa21.22■□□□□ 0.99
SNHG6-203ENST00000520944 DNAAF2Q9NVR5 837 aaKnown RBP21.22■□□□□ 0.99
SNHG6-203ENST00000520944 AJAP1Q9UKB5 411 aaPredicted RBP21.22■□□□□ 0.99
SNHG6-203ENST00000520944 NCKAP1Q9Y2A7 1128 aa21.22■□□□□ 0.99
SNHG6-203ENST00000520944 EPG5Q9HCE0 2579 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 TNRC6BQ9UPQ9 1833 aaKnown RBP21.21■□□□□ 0.99
SNHG6-203ENST00000520944 BCAT2O15382 392 aaPredicted RBP21.21■□□□□ 0.99
SNHG6-203ENST00000520944 SRPRAP08240 638 aaKnown RBP21.21■□□□□ 0.99
SNHG6-203ENST00000520944 ACSL1P33121 698 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 PI4KAP42356 2102 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 PITX1P78337 314 aaPredicted RBP21.21■□□□□ 0.99
SNHG6-203ENST00000520944 ECT2LQ008S8 904 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 SFSWAPQ12872 951 aaKnown RBP21.21■□□□□ 0.99
SNHG6-203ENST00000520944 FOXC1Q12948 553 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 MTA1Q13330 715 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 SLC14A1Q13336 389 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 EIF4EBP2Q13542 120 aaPredicted RBP21.21■□□□□ 0.99
SNHG6-203ENST00000520944 KCNJ12Q14500 433 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 HNRNPA1L2Q32P51 320 aaKnown RBP21.21■□□□□ 0.99
SNHG6-203ENST00000520944 MIIPQ5JXC2 388 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 RABGAP1LQ5R372 815 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 TTC39BQ5VTQ0 682 aaPredicted RBP21.21■□□□□ 0.99
SNHG6-203ENST00000520944 FAM183BPQ6ZVS7 135 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 FAM71AQ8IYT1 594 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 OR2I1PQ8NGU4 316 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 GANCQ8TET4 914 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 SNX19Q92543 992 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 EIF2B4Q9UI10 523 aaKnown RBP21.21■□□□□ 0.99
SNHG6-203ENST00000520944 INTS6Q9UL03 887 aaKnown RBP21.21■□□□□ 0.99
SNHG6-203ENST00000520944 SCML1Q9UN30 329 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 ERVW-1Q9UQF0 538 aa21.21■□□□□ 0.99
SNHG6-203ENST00000520944 PNMA6AP0CW24 399 aaPredicted RBP21.2■□□□□ 0.98
SNHG6-203ENST00000520944 C7P10643 843 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 SLC6A3Q01959 620 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 GRIK2Q13002 908 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 NME3Q13232 169 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 SLC12A1Q13621 1099 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 DRAP1Q14919 205 aaPredicted RBP21.2■□□□□ 0.98
SNHG6-203ENST00000520944 PIP4P1Q86T03 277 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 ZDHHC17Q8IUH5 632 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 TMEM35BQ8NCS4 154 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 RSPH9Q9H1X1 276 aaPredicted RBP21.2■□□□□ 0.98
SNHG6-203ENST00000520944 MTG2Q9H4K7 406 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 SGK2Q9HBY8 427 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 PLCB1Q9NQ66 1216 aa21.2■□□□□ 0.98
SNHG6-203ENST00000520944 SEMA4FO95754 770 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 ERBB2P04626 1255 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 EEF1GP26641 437 aaKnown RBP21.19■□□□□ 0.98
SNHG6-203ENST00000520944 NOS2P35228 1153 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 RDXP35241 583 aaKnown RBP21.19■□□□□ 0.98
SNHG6-203ENST00000520944 NNMTP40261 264 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 OXCT1P55809 520 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 TCP11X2Q5H9J9 407 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 KLHDC7AQ5VTJ3 777 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 OLFML1Q6UWY5 402 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 DHX40Q8IX18 779 aaKnown RBP21.19■□□□□ 0.98
SNHG6-203ENST00000520944 MYO19Q96H55 970 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 MRGPRX3Q96LB0 322 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 PPP1R9BQ96SB3 815 aa21.19■□□□□ 0.98
SNHG6-203ENST00000520944 C6orf106Q9H6K1 298 aaPredicted RBP21.19■□□□□ 0.98
SNHG6-203ENST00000520944 SAMSN1Q9NSI8 373 aaKnown RBP21.19■□□□□ 0.98
SNHG6-203ENST00000520944 CEP192Q8TEP8 1941 aa21.18■□□□□ 0.98
SNHG6-203ENST00000520944 TARSL2A2RTX5 802 aaKnown RBP21.18■□□□□ 0.98
SNHG6-203ENST00000520944 SIN3BO75182 1162 aa21.18■□□□□ 0.98
SNHG6-203ENST00000520944 CTSOP43234 321 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms