RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CYTH4Q9UIA0 394 aa20.36■□□□□ 0.85
PABPC1-215ENST00000520804 SLCO1B1Q9Y6L6 691 aa20.36■□□□□ 0.85
PABPC1-215ENST00000520804 A0A1B0GVT2 93 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 E5RJQ4 531 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 THAP12O43422 761 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 CBFA2T3O75081 653 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 MOCS2O96007 188 aaPredicted RBP20.35■□□□□ 0.85
PABPC1-215ENST00000520804 GNA15P30679 374 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 AFF3P51826 1226 aaKnown RBP20.35■□□□□ 0.85
PABPC1-215ENST00000520804 CDH18Q13634 790 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 HLA-BQ31612 363 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 FSCBQ5H9T9 825 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 CCDC117Q8IWD4 279 aaPredicted RBP20.35■□□□□ 0.85
PABPC1-215ENST00000520804 KDM1BQ8NB78 822 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 BIRC7Q96CA5 298 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 MRGPRX3Q96LB0 322 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 FAM81BQ96LP2 452 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 MED15Q96RN5 788 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 POPDC2Q9HBU9 364 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 SGK2Q9HBY8 427 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 OSGEPQ9NPF4 335 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 ACP6Q9NPH0 428 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 TM7SF3Q9NS93 570 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 XPO7Q9UIA9 1087 aaKnown RBP20.35■□□□□ 0.85
PABPC1-215ENST00000520804 PCOLCE2Q9UKZ9 415 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 FNDC3AQ9Y2H6 1198 aaKnown RBP20.35■□□□□ 0.85
PABPC1-215ENST00000520804 NUMA1Q14980 2115 aa20.35■□□□□ 0.85
PABPC1-215ENST00000520804 SIN3BO75182 1162 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 LUC7L3O95232 432 aaKnown RBP20.34■□□□□ 0.85
PABPC1-215ENST00000520804 IGLV3-25P01717 112 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 APOEP02649 317 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 CSNK1EP49674 416 aaKnown RBP20.34■□□□□ 0.85
PABPC1-215ENST00000520804 YWHAZP63104 245 aaKnown RBP20.34■□□□□ 0.85
PABPC1-215ENST00000520804 ARID5BQ14865 1188 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 HNRNPA1L2Q32P51 320 aaKnown RBP20.34■□□□□ 0.85
PABPC1-215ENST00000520804 PITRM1Q5JRX3 1037 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 GJB7Q6PEY0 223 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 TRIM65Q6PJ69 517 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 MMS22LQ6ZRQ5 1243 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 GLRX5Q86SX6 157 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 ADAMTS14Q8WXS8 1223 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 CRACR2AQ9BSW2 395 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 PABPC3Q9H361 631 aaKnown RBP20.34■□□□□ 0.85
PABPC1-215ENST00000520804 THAP9Q9H5L6 903 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 TM9SF3Q9HD45 589 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 RWDD2AQ9UIY3 292 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 SCML1Q9UN30 329 aa20.34■□□□□ 0.85
PABPC1-215ENST00000520804 CFAP47Q6ZTR5 3102 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 BECN2A8MW95 431 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 TRUB2O95900 331 aaKnown RBP20.33■□□□□ 0.85
PABPC1-215ENST00000520804 SRPRAP08240 638 aaKnown RBP20.33■□□□□ 0.85
PABPC1-215ENST00000520804 FTH1P19P0C7X4 201 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 TACR2P21452 398 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 PDCLQ13371 301 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 EIF4EBP2Q13542 120 aaPredicted RBP20.33■□□□□ 0.85
PABPC1-215ENST00000520804 ZC3H12AQ5D1E8 599 aaKnown RBP20.33■□□□□ 0.85
PABPC1-215ENST00000520804 RAP1GAP2Q684P5 730 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 DBX2Q6ZNG2 339 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 USP30Q70CQ3 517 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 DHX40Q8IX18 779 aaKnown RBP20.33■□□□□ 0.85
PABPC1-215ENST00000520804 LGI2Q8N0V4 545 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 SETD7Q8WTS6 366 aaKnown RBP20.33■□□□□ 0.85
PABPC1-215ENST00000520804 ZCCHC14Q8WYQ9 949 aaKnown RBP20.33■□□□□ 0.85
PABPC1-215ENST00000520804 BTN2A3PQ96KV6 586 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 KIAA1522Q9P206 1035 aaPredicted RBP20.33■□□□□ 0.85
PABPC1-215ENST00000520804 KIAA1468Q9P260 1216 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 TJP2Q9UDY2 1190 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 ERVW-1Q9UQF0 538 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 NCKAP1Q9Y2A7 1128 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 PCDHGB2Q9Y5G2 931 aa20.33■□□□□ 0.85
PABPC1-215ENST00000520804 WDFY3Q8IZQ1 3526 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 RNASEH1O60930 286 aaKnown RBP20.32■□□□□ 0.84
PABPC1-215ENST00000520804 FSBPO95073 299 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 MOCS3O95396 460 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 SLC9A1P19634 815 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 CD27P26842 260 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 CTSOP43234 321 aaPredicted RBP20.32■□□□□ 0.84
PABPC1-215ENST00000520804 GRIA4P48058 902 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 PITX1P78337 314 aaPredicted RBP20.32■□□□□ 0.84
PABPC1-215ENST00000520804 TAF5Q15542 800 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 TEAD4Q15561 434 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 ARHGAP44Q17R89 818 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 KIF19Q2TAC6 998 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 C9orf64Q5T6V5 341 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 CHSY1Q86X52 802 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 ORAI3Q9BRQ5 295 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.32■□□□□ 0.84
PABPC1-215ENST00000520804 FBXL12Q9NXK8 326 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 APEX2Q9UBZ4 518 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 SNX11Q9Y5W9 270 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 AKAP13Q12802 2813 aa20.32■□□□□ 0.84
PABPC1-215ENST00000520804 TARSL2A2RTX5 802 aaKnown RBP20.31■□□□□ 0.84
PABPC1-215ENST00000520804 USP8P40818 1118 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 CST6Q15828 149 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 KIAA0895LQ68EN5 471 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 GBP6Q6ZN66 633 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 CREBRFQ8IUR6 639 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 APCDD1Q8J025 514 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 WDTC1Q8N5D0 677 aa20.31■□□□□ 0.84
PABPC1-215ENST00000520804 PNPLA1Q8N8W4 532 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms