RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 STAT6P42226 847 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 PCP4P48539 62 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 CCT5P48643 541 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 AARSP49588 968 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 FOXL2P58012 376 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 GAB1Q13480 694 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 ZNF268Q14587 947 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 TIGD6Q17RP2 521 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 AWAT1Q58HT5 328 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 MIS18BP1Q6P0N0 1132 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 ZNF66Q6ZN08 573 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 EXOC8Q8IYI6 725 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 CELF1Q92879 486 aaKnown RBP3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 MECRQ9BV79 373 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 TWSG1Q9GZX9 223 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 SFXN1Q9H9B4 322 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 PRDM16Q9HAZ2 1276 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 RAB21Q9UL25 225 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 TRPC5Q9UL62 973 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 B3GNT3Q9Y2A9 372 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 CARMIL1Q5VZK9 1371 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 POLR2AP24928 1970 aaKnown RBP3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 EMSYQ7Z589 1322 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 FNDC1Q4ZHG4 1894 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 ARHGAP35Q9NRY4 1499 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 CCNB3Q8WWL7 1395 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 CYP2D7A0A087X1C5 515 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 C16orf96A6NNT2 1141 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 INPPL1O15357 1258 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 EIF5BO60841 1220 aaKnown RBP3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 CELA2AP08217 269 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 TGM2P21980 687 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 FAM3BP58499 235 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 DMWDQ09019 674 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 PPFIA1Q13136 1202 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 EFR3AQ14156 821 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 SEC23BQ15437 767 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 GALNTL6Q49A17 601 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 LDHAL6AQ6ZMR3 332 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 RFX6Q8HWS3 928 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 ANKRD18AQ8IVF6 992 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 C9orf106Q8NAJ2 232 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 SLC2A12Q8TD20 617 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 PIGKQ92643 395 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 MAP4K1Q92918 833 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 SCLT1Q96NL6 688 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 FCRL5Q96RD9 977 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 PIGSQ96S52 555 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 HTATIP2Q9BUP3 242 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 GATA5Q9BWX5 397 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 ABHD16BQ9H3Z7 469 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 G6PC2Q9NQR9 355 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 PI4KBQ9UBF8 816 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 COPG1Q9Y678 874 aaKnown RBP3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 KAT6AQ92794 2004 aa3.69□□□□□ -1.82
HMGB1P41-201ENST00000520234 AQRO60306 1485 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 E7EVH7 732 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 RRHO14718 337 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 SEPT4O43236 478 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 PLAUP00749 431 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 TK1P04183 234 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 RFPL3SP0C7P2 107 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 AKR1A1P14550 325 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 HOXB6P17509 224 aaKnown RBP3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 TFEBP19484 476 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 RPS6KB1P23443 525 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 IDUAP35475 653 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 RCAN1P53805 252 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 SLC12A2P55011 1212 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 SLC37A1P57057 533 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 ACTR2P61160 394 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 GHRHRQ02643 423 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 RNASELQ05823 741 aaKnown RBP3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 SRSF4Q08170 494 aaKnown RBP3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 DCTN1Q14203 1278 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 SMAD1Q15797 465 aaKnown RBP3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 ANXA2RQ3ZCQ2 193 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 CEP78Q5JTW2 689 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 ANKRD45Q5TZF3 282 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 RBM44Q6ZP01 1051 aaKnown RBP3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 RRAGAQ7L523 313 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 RASGRP2Q7LDG7 609 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 TFAP2DQ7Z6R9 452 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 NEK8Q86SG6 692 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 MOGAT3Q86VF5 341 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 SRRM1Q8IYB3 904 aaKnown RBP3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 FSIP1Q8NA03 581 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 FAM47BQ8NA70 645 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 GOLGA1Q92805 767 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 KAT2BQ92831 832 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 GPR78Q96P69 363 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 ABHD14AQ9BUJ0 271 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 TM2D2Q9BX73 214 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 FRMD4BQ9Y2L6 1034 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 PCDHA10Q9Y5I2 948 aa3.68□□□□□ -1.82
HMGB1P41-201ENST00000520234 SMIM35A0A1B0GVV1 85 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 FAM90A20PA6NIJ5 464 aa3.67□□□□□ -1.82
HMGB1P41-201ENST00000520234 BCAR3O75815 825 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms