RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 CELSR2Q9HCU4 2923 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CLEC18AA5D8T8 446 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 LRRC72A6NJI9 287 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 KCNK3O14649 394 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 KIAA0391O15091 583 aaKnown RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 TLR5O60602 858 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 USP12O75317 370 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 PPFIA2O75334 1257 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 TACC1O75410 805 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 FAM13AO94988 1023 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 PENKP01210 267 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CYBBP04839 570 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 MPOP05164 745 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 TMEM191BP0C7N4 346 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 IRF1P10914 325 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 LMO2P25791 158 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 ADH6P28332 368 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 ATP5C1P36542 298 aaKnown RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 NUDT1P36639 197 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CCR10P46092 362 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 HARS2P49590 506 aaKnown RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 MFAP3P55082 362 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CLDN6P56747 220 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 RIPPLY3P57055 190 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 PSMC1P62191 440 aaKnown RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 KCNA1Q09470 495 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 IFRD2Q12894 506 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 ZNF211Q13398 564 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 GNL2Q13823 731 aaKnown RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 BECN1Q14457 450 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 TLR1Q15399 786 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 SURF1Q15526 300 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 ARL13BQ3SXY8 428 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 KCNT1Q5JUK3 1230 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CDCP2Q5VXM1 449 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 KIAA1614Q5VZ46 1190 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 KIAA0895LQ68EN5 471 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CLEC18BQ6UXF7 455 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CRELD2Q6UXH1 353 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 DTHD1Q6ZMT9 781 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CHSY3Q70JA7 882 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 KANSL1Q7Z3B3 1105 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 FAM124AQ86V42 546 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 IQCHQ86VS3 1027 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 BRSK2Q8IWQ3 736 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 ARL14Q8N4G2 192 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 C4orf32Q8N8J7 132 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CLEC18CQ8NCF0 446 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 NSUN7Q8NE18 718 aaKnown RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CXorf38Q8TB03 319 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 KBTBD7Q8WVZ9 684 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 GTF3C6Q969F1 213 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 ERLEC1Q96DZ1 483 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 SMARCD1Q96GM5 515 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 HPDLQ96IR7 371 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 VCPIP1Q96JH7 1222 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CCNL2Q96S94 520 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CDK5RAP1Q96SZ6 601 aaKnown RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 REEP2Q9BRK0 252 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 SRRTQ9BXP5 876 aaKnown RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 DCLK3Q9C098 648 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 ZCCHC2Q9C0B9 1178 aaKnown RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 SNX25Q9H3E2 840 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 CCSER2Q9H7U1 834 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 ASCL3Q9NQ33 180 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 ELOVL2Q9NXB9 296 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 RBAKQ9NYW8 714 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-207ENST00000520168 IL37Q9NZH6 218 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 PLA2G4CQ9UP65 541 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 EXOC7Q9UPT5 735 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 PCDHGA8Q9Y5G5 932 aa5.13□□□□□ -1.59
SDCBP-207ENST00000520168 TDRD6O60522 2096 aaKnown RBP5.12□□□□□ -1.59
SDCBP-207ENST00000520168 CREBBPQ92793 2442 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 TLR4O00206 839 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 CBX4O00257 560 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 GREM1O60565 184 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 RNASEH1O60930 286 aaKnown RBP5.12□□□□□ -1.59
SDCBP-207ENST00000520168 ATP2C2O75185 946 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 TBCAO75347 108 aaKnown RBP5.12□□□□□ -1.59
SDCBP-207ENST00000520168 TNNC2P02585 160 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 KRT18P05783 430 aaKnown RBP5.12□□□□□ -1.59
SDCBP-207ENST00000520168 IGHV4-34P06331 123 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 PLA2G4BP0C869 781 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 ALPPL2P10696 532 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 CKMT1AP12532 417 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 PLCG1P19174 1290 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 TRIM21P19474 475 aaKnown RBP5.12□□□□□ -1.59
SDCBP-207ENST00000520168 GARTP22102 1010 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 PRKCHP24723 683 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 ITGB7P26010 798 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 GNL1P36915 607 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-207ENST00000520168 PLA2G4AP47712 749 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 DUSP3P51452 185 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-207ENST00000520168 CCR5P51681 352 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 SLC5A3P53794 718 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 NXPH1P58417 271 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 ZNF445P59923 1031 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 DAB2P98082 770 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 TLE1Q04724 770 aa5.12□□□□□ -1.59
SDCBP-207ENST00000520168 SHBQ15464 509 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms