RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 KDM1BQ8NB78 822 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 HJURPQ8NCD3 748 aaPredicted RBP12.24□□□□□ -0.45
POLB-208ENST00000520008 DQX1Q8TE96 717 aaKnown RBP12.24□□□□□ -0.45
POLB-208ENST00000520008 SETD7Q8WTS6 366 aaKnown RBP12.24□□□□□ -0.45
POLB-208ENST00000520008 GOLGA1Q92805 767 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 SMARCE1Q969G3 411 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 DHTKD1Q96HY7 919 aaPredicted RBP12.24□□□□□ -0.45
POLB-208ENST00000520008 MTG2Q9H4K7 406 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 SERGEFQ9UGK8 458 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 SCML1Q9UN30 329 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 LHX6Q9UPM6 363 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 CNTN6Q9UQ52 1028 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 ANKRD6Q9Y2G4 727 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 GPSM3Q9Y4H4 160 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 PCDHB4Q9Y5E5 795 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 LOC400499M0QZD8 3231 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 BAHCC1Q9P281 2608 aa12.24□□□□□ -0.45
POLB-208ENST00000520008 ITIH6Q6UXX5 1313 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 PSMA7O14818 248 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 SMC2O95347 1197 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 ASLP04424 464 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 ATXN1LP0C7T5 689 aaKnown RBP12.23□□□□□ -0.45
POLB-208ENST00000520008 POLR2EP19388 210 aaKnown RBP12.23□□□□□ -0.45
POLB-208ENST00000520008 BMP6P22004 513 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 CSKP41240 450 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 GPD2P43304 727 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 RPS24P62847 133 aaKnown RBP12.23□□□□□ -0.45
POLB-208ENST00000520008 MEA1Q16626 185 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 FSCBQ5H9T9 825 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 MS4A13Q5J8X5 152 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 KCNT1Q5JUK3 1230 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 LAYNQ6UX15 382 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 BEND5Q7L4P6 421 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 ARHGEF19Q8IW93 802 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 ELOA2Q8IYF1 753 aaPredicted RBP12.23□□□□□ -0.45
POLB-208ENST00000520008 SNX19Q92543 992 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 IGSF8Q969P0 613 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 KREMEN1Q96MU8 473 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 SERPINB11Q96P15 392 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 CDC6Q99741 560 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 NUCKS1Q9H1E3 243 aaKnown RBP12.23□□□□□ -0.45
POLB-208ENST00000520008 PABPC3Q9H361 631 aaKnown RBP12.23□□□□□ -0.45
POLB-208ENST00000520008 DKK4Q9UBT3 224 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 SUN2Q9UH99 717 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 ADAMTS1Q9UHI8 967 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 TLR6Q9Y2C9 796 aa12.23□□□□□ -0.45
POLB-208ENST00000520008 H0Y8X5 98 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 SIN3BO75182 1162 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 IGLV3-25P01717 112 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 CCT8P50990 548 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 MARSP56192 900 aaKnown RBP12.22□□□□□ -0.45
POLB-208ENST00000520008 EIF4EBP2Q13542 120 aaPredicted RBP12.22□□□□□ -0.45
POLB-208ENST00000520008 TEAD4Q15561 434 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 PITRM1Q5JRX3 1037 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 C9orf64Q5T6V5 341 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 MMS22LQ6ZRQ5 1243 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 TAC4Q86UU9 113 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 TRIM59Q8IWR1 403 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 RHBDD1Q8TEB9 315 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 SLC4A5Q9BY07 1137 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 EBF2Q9HAK2 575 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 XPO7Q9UIA9 1087 aaKnown RBP12.22□□□□□ -0.45
POLB-208ENST00000520008 MAN1B1Q9UKM7 699 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 NAALADL1Q9UQQ1 740 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 CABIN1Q9Y6J0 2220 aa12.22□□□□□ -0.45
POLB-208ENST00000520008 APC2O95996 2303 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 KNL1Q8NG31 2342 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 A0A1W2PPC4 97 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 PPP1R3GB7ZBB8 358 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 VILLO15195 856 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 SART1O43290 800 aaKnown RBP12.21□□□□□ -0.45
POLB-208ENST00000520008 FSBPO95073 299 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 LUC7L3O95232 432 aaKnown RBP12.21□□□□□ -0.45
POLB-208ENST00000520008 SRPRAP08240 638 aaKnown RBP12.21□□□□□ -0.45
POLB-208ENST00000520008 PPP1R2P41236 205 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 CTSOP43234 321 aaPredicted RBP12.21□□□□□ -0.45
POLB-208ENST00000520008 GRK6P43250 576 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 GALCP54803 685 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 RACK1P63244 317 aaKnown RBP12.21□□□□□ -0.45
POLB-208ENST00000520008 CAMK2BQ13554 666 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 SUZ12Q15022 739 aaKnown RBP12.21□□□□□ -0.45
POLB-208ENST00000520008 CST6Q15828 149 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 CCDC40Q4G0X9 1142 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 DCAF6Q58WW2 860 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 SYPL2Q5VXT5 272 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 KIAA0895LQ68EN5 471 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 RRAGAQ7L523 313 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 DHX40Q8IX18 779 aaKnown RBP12.21□□□□□ -0.45
POLB-208ENST00000520008 SCUBE3Q8IX30 993 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 MDM1Q8TC05 714 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 STK32AQ8WU08 396 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 FAM131CQ96AQ9 280 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 DDX50Q9BQ39 737 aaKnown RBP12.21□□□□□ -0.45
POLB-208ENST00000520008 MIS12Q9H081 205 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 CCDC86Q9H6F5 360 aaKnown RBP12.21□□□□□ -0.45
POLB-208ENST00000520008 STIM2Q9P246 746 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 CYTH4Q9UIA0 394 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 FZD4Q9ULV1 537 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 ERVW-1Q9UQF0 538 aa12.21□□□□□ -0.45
POLB-208ENST00000520008 A0A1B0GTQ1 180 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms