RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 TRMT11Q7Z4G4 463 aaKnown RBP23.32■■□□□ 1.32
SKP1-206ENST00000519321 AHI1Q8N157 1196 aa23.32■■□□□ 1.32
SKP1-206ENST00000519321 USP33Q8TEY7 942 aa23.32■■□□□ 1.32
SKP1-206ENST00000519321 MYEOVQ96EZ4 313 aa23.32■■□□□ 1.32
SKP1-206ENST00000519321 PPP1R9BQ96SB3 815 aa23.32■■□□□ 1.32
SKP1-206ENST00000519321 BAG1Q99933 345 aaPredicted RBP23.32■■□□□ 1.32
SKP1-206ENST00000519321 TRIM7Q9C029 511 aa23.32■■□□□ 1.32
SKP1-206ENST00000519321 RAB6CQ9H0N0 254 aa23.32■■□□□ 1.32
SKP1-206ENST00000519321 CLEC4EQ9ULY5 219 aa23.32■■□□□ 1.32
SKP1-206ENST00000519321 EPN1Q9Y6I3 576 aaPredicted RBP23.32■■□□□ 1.32
SKP1-206ENST00000519321 DRGXA6NNA5 263 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 EIF3CLB5ME19 914 aaKnown RBP23.31■■□□□ 1.32
SKP1-206ENST00000519321 E9PAM4 449 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 LAMTOR5O43504 91 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 HLA-FP30511 346 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 PCK1P35558 622 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 CDH4P55283 916 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 ZNF252P-AS1Q0IIN9 211 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 C14orf80Q86SX3 495 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 RHOT2Q8IXI1 618 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 CCAR2Q8N163 923 aaKnown RBP23.31■■□□□ 1.32
SKP1-206ENST00000519321 CCDC185Q8N715 623 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 NIPA2Q8N8Q9 360 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 RPLP0P6Q8NHW5 317 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 IGSF8Q969P0 613 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 EIF3CQ99613 913 aaKnown RBP23.31■■□□□ 1.32
SKP1-206ENST00000519321 RETREG1Q9H6L5 497 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 TMPRSS4Q9NRS4 437 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 ABCB8Q9NUT2 735 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 KIAA1522Q9P206 1035 aaPredicted RBP23.31■■□□□ 1.32
SKP1-206ENST00000519321 OR12D3Q9UGF7 316 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 GGA2Q9UJY4 613 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 HCN4Q9Y3Q4 1203 aa23.31■■□□□ 1.32
SKP1-206ENST00000519321 IGLV3-10A0A075B6K4 115 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.3■■□□□ 1.32
SKP1-206ENST00000519321 PRRT4C9JH25 899 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 NPC1O15118 1278 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 PRPSAP2O60256 369 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 PABPC1P11940 636 aaKnown RBP23.3■■□□□ 1.32
SKP1-206ENST00000519321 MAGEA1P43355 309 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 KIR2DL1P43626 348 aaPredicted RBP23.3■■□□□ 1.32
SKP1-206ENST00000519321 CXCL12P48061 93 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 SEC13P55735 322 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 ZNF177Q13360 481 aaPredicted RBP23.3■■□□□ 1.32
SKP1-206ENST00000519321 SLC12A1Q13621 1099 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 GAS6Q14393 721 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 DMC1Q14565 340 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 KIAA0907Q7Z7F0 614 aaPredicted RBP23.3■■□□□ 1.32
SKP1-206ENST00000519321 PPARGC1AQ9UBK2 798 aaKnown RBP23.3■■□□□ 1.32
SKP1-206ENST00000519321 FZD10Q9ULW2 581 aa23.3■■□□□ 1.32
SKP1-206ENST00000519321 SRGAP2O75044 1071 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 NDUFA10O95299 355 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 MOCS3O95396 460 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 GGCXP38435 758 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 GEN1Q17RS7 908 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 C2orf27AQ580R0 203 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 PSTKQ8IV42 348 aaKnown RBP23.29■■□□□ 1.32
SKP1-206ENST00000519321 ZNF683Q8IZ20 524 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 ZNF513Q8N8E2 541 aaPredicted RBP23.29■■□□□ 1.32
SKP1-206ENST00000519321 ZYG11BQ9C0D3 744 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 IRF2BPLQ9H1B7 796 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 ELOVL2Q9NXB9 296 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 FBXO4Q9UKT5 387 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 ZNF318Q5VUA4 2279 aa23.29■■□□□ 1.32
SKP1-206ENST00000519321 SOWAHDA6NJG2 315 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 LRCH4O75427 683 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 PAPSS2O95340 614 aaPredicted RBP23.28■■□□□ 1.32
SKP1-206ENST00000519321 MIPP30301 263 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 L1CAMP32004 1257 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 TIE1P35590 1138 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 MRE11P49959 708 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 LMAN2Q12907 356 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 TCEAL1Q15170 157 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 EOGTQ5NDL2 527 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 ERMARDQ5T6L9 678 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 SDE2Q6IQ49 451 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 SYT13Q7L8C5 426 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 SFTPA1Q8IWL2 248 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 SLC35G2Q8TBE7 412 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 WFDC5Q8TCV5 224 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 RFFLQ8WZ73 363 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 EPAS1Q99814 870 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 USP18Q9UMW8 372 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 PCDHA13Q9Y5I0 950 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 SNX10Q9Y5X0 201 aa23.28■■□□□ 1.32
SKP1-206ENST00000519321 MTA2O94776 668 aa23.27■■□□□ 1.32
SKP1-206ENST00000519321 ATP5BP06576 529 aaKnown RBP23.27■■□□□ 1.32
SKP1-206ENST00000519321 HNRNPLP14866 589 aaKnown RBP eCLIP23.27■■□□□ 1.328e-9■□□□□ 9.2
SKP1-206ENST00000519321 POLR2EP19388 210 aaKnown RBP23.27■■□□□ 1.32
SKP1-206ENST00000519321 CD70P32970 193 aa23.27■■□□□ 1.32
SKP1-206ENST00000519321 HTR7P34969 479 aa23.27■■□□□ 1.32
SKP1-206ENST00000519321 ANGPT1Q15389 498 aa23.27■■□□□ 1.32
SKP1-206ENST00000519321 BOLA3Q53S33 107 aa23.27■■□□□ 1.32
SKP1-206ENST00000519321 EMC10Q5UCC4 262 aa23.27■■□□□ 1.32
SKP1-206ENST00000519321 MANEALQ5VSG8 457 aa23.27■■□□□ 1.32
SKP1-206ENST00000519321 SETD3Q86TU7 594 aaPredicted RBP23.27■■□□□ 1.32
SKP1-206ENST00000519321 CIR1Q86X95 450 aaPredicted RBP23.27■■□□□ 1.32
SKP1-206ENST00000519321 ARFGAP1Q8N6T3 406 aa23.27■■□□□ 1.32
SKP1-206ENST00000519321 IL17RCQ8NAC3 791 aa23.27■■□□□ 1.32
SKP1-206ENST00000519321 TBC1D31Q96DN5 1066 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms