RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 DEFB119Q8N690 84 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 RXFP2Q8WXD0 754 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 MYO19Q96H55 970 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 ZC3H10Q96K80 434 aaKnown RBP13.76□□□□□ -0.21
VEGFA-219ENST00000518824 MRGPRX1Q96LB2 322 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 MKRN2Q9H000 416 aaKnown RBP13.76□□□□□ -0.21
VEGFA-219ENST00000518824 TKTL2Q9H0I9 626 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 SIK2Q9H0K1 926 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 ARRDC1-AS1Q9H2J1 176 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 ARHGEF38Q9NXL2 777 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 RAB23Q9ULC3 237 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 CEP192Q8TEP8 1941 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 TMCO5BA8MYB1 307 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 F5H5T6 163 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 CNTN5O94779 1100 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 ALDH1A2O94788 518 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 RETP07949 1114 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 FERP16591 822 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 ABCB4P21439 1286 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 MZF1P28698 734 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 CSKP41240 450 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 COPAP53621 1224 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 EIF4HQ15056 248 aaKnown RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 CDO1Q16878 200 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 SKOR2Q2VWA4 1001 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 CCDC14Q49A88 953 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 USP39Q53GS9 565 aaKnown RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 ALFQ53S48 1182 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 SDE2Q6IQ49 451 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 ZNF571Q7Z3V5 609 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 FAM131BQ86XD5 332 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 PHF13Q86YI8 300 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 CCAR2Q8N163 923 aaKnown RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 WFIKKN2Q8TEU8 576 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 PGAP3Q96FM1 320 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 MRGPRX3Q96LB0 322 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 DDX50Q9BQ39 737 aaKnown RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 TMEM245Q9H330 911 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 HAUS4Q9H6D7 363 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 WDCPQ9H6R7 721 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 ADAM22Q9P0K1 906 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 IFNKQ9P0W0 207 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 GMEB2Q9UKD1 530 aa13.75□□□□□ -0.21
VEGFA-219ENST00000518824 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 TNRC6BQ9UPQ9 1833 aaKnown RBP13.75□□□□□ -0.21
VEGFA-219ENST00000518824 NUP205Q92621 2012 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 C2CD4BA6NLJ0 364 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 H0Y626 953 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 SLC2A3P11169 496 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 PDGFRAP16234 1089 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 RFC1P35251 1148 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-219ENST00000518824 NSFP46459 744 aaKnown RBP13.74□□□□□ -0.21
VEGFA-219ENST00000518824 UBASH3AP57075 661 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 CDH18Q13634 790 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 SF3A2Q15428 464 aaKnown RBP13.74□□□□□ -0.21
VEGFA-219ENST00000518824 ASIC2Q16515 512 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 PITRM1Q5JRX3 1037 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 PMS2CLQ68D20 193 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 CXorf57Q6NSI4 855 aaKnown RBP13.74□□□□□ -0.21
VEGFA-219ENST00000518824 WDR59Q6PJI9 974 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 SERPINA13PQ6UXR4 307 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 ARMCX6Q7L4S7 300 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 AHI1Q8N157 1196 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 MSANTD4Q8NCY6 345 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 UCMAQ8WVF2 138 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 ALG14Q96F25 216 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 IRX2Q9BZI1 471 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-219ENST00000518824 RXFP3Q9NSD7 469 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 SLC12A6Q9UHW9 1150 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 STAP1Q9ULZ2 295 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 USP18Q9UMW8 372 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 CYP8B1Q9UNU6 501 aa13.74□□□□□ -0.21
VEGFA-219ENST00000518824 DOCK4Q8N1I0 1966 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 IGHV1OR15-9A0A0B4J2B8 117 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 GOLGA6L19H0YKK7 550 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 DDX3XO00571 662 aaKnown RBP eCLIP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 ATMINO43313 823 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 TIMM44O43615 452 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 ENDOD1O94919 500 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 EPN2O95208 641 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 EPHX1P07099 455 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 DLDP09622 509 aaKnown RBP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 POLR2EP19388 210 aaKnown RBP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 TNFAIP3P21580 790 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 RRM1P23921 792 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 PTGER3P43115 390 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 STK19P49842 368 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 GSCP56915 257 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 RPL7AP62424 266 aaKnown RBP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 OGDHQ02218 1023 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 PLEKHG6Q3KR16 790 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 FNDC3BQ53EP0 1204 aaKnown RBP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 BRMS1LQ5PSV4 323 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 TCEAL6Q6IPX3 200 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 ACAD10Q6JQN1 1059 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 KIAA1324Q6UXG2 1013 aaKnown RBP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 TMEFF1Q8IYR6 380 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 MCOLN2Q8IZK6 566 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms