RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SAMD11Q96NU1 681 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 GSDMAQ96QA5 445 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 ORAI3Q9BRQ5 295 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 C11orf84Q9BUA3 381 aaPredicted RBP2.93□□□□□ -1.94
SKP1-204ENST00000517691 COLEC11Q9BWP8 271 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 HAPLN2Q9GZV7 340 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 ST6GALNAC4Q9H4F1 302 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 CWH43Q9H720 699 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 NRDE2Q9H7Z3 1164 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 MTMR10Q9NXD2 777 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 PRR13Q9NZ81 148 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 SPG21Q9NZD8 308 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 DNAJB4Q9UDY4 337 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 XPO7Q9UIA9 1087 aaKnown RBP2.93□□□□□ -1.94
SKP1-204ENST00000517691 SRPK3Q9UPE1 567 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 PLAGL2Q9UPG8 496 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 PRG3Q9Y2Y8 225 aaPredicted RBP2.93□□□□□ -1.94
SKP1-204ENST00000517691 PCDHA5Q9Y5H7 936 aa2.93□□□□□ -1.94
SKP1-204ENST00000517691 TRIOBPQ9H2D6 2365 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 A0A1W2PPH5 198 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 ZNF233A6NK53 670 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 H3BNC9 293 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 OVOL3O00110 214 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 DDX3XO00571 662 aaKnown RBP eCLIP2.92□□□□□ -1.94
SKP1-204ENST00000517691 ABLIM1O14639 778 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PTGESO14684 152 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 NRP1O14786 923 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GRM6O15303 877 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CALUO43852 315 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 EXTL3O43909 919 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 EXOC3O60645 756 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 LPXNO60711 386 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 B3GAT3O94766 335 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PAPLNO95428 1278 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PRAMEF1O95521 474 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CXCL14O95715 111 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PIGRP01833 764 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 ITGB1P05556 798 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GALTP07902 379 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GLB1P16278 677 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GRK2P25098 689 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 ADSSP30520 456 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 HOXD13P35453 343 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 ACTN2P35609 894 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 ATP6V1E1P36543 226 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CTSKP43235 329 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SEPHS1P49903 392 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 UBASH3AP57075 661 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GRIK3Q13003 919 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 STIM1Q13586 685 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SMC1AQ14683 1233 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 KCNB1Q14721 858 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SMAD1Q15797 465 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 ZNF658Q5TYW1 1059 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 BROXQ5VW32 411 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 IZUMO3Q5VZ72 239 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 KLHL10Q6JEL2 608 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 KIAA1841Q6NSI8 718 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 JMJD6Q6NYC1 403 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 SLC39A4Q6P5W5 647 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CLEC17AQ6ZS10 378 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 DNAJB7Q7Z6W7 309 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 RBM23Q86U06 439 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 CEP57Q86XR8 500 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 ANKRD13BQ86YJ7 626 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CD302Q8IX05 232 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 COLGALT2Q8IYK4 626 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TOP6BLQ8N6T0 577 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 ZNF527Q8NB42 609 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 DTWD2Q8NBA8 298 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 KIAA0895Q8NCT3 520 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 LSM14AQ8ND56 463 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 SIMC1Q8NDZ2 872 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GOLGA5Q8TBA6 731 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SPPL3Q8TCT6 385 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 C18orf25Q96B23 403 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 ARL8AQ96BM9 186 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SNX27Q96L92 541 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GUCD1Q96NT3 240 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SLC2A13Q96QE2 648 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TSG101Q99816 390 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CBWD1Q9BRT8 395 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 LRFN3Q9BTN0 628 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 DUSP23Q9BVJ7 150 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 STRA6Q9BX79 667 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CXCL16Q9H2A7 254 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 RC3H2Q9HBD1 1191 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 ENTPD7Q9NQZ7 604 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PLSCR4Q9NRQ2 329 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 AGPAT3Q9NRZ7 376 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 LMBRD1Q9NUN5 540 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SLC38A7Q9NVC3 462 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 RBAKQ9NYW8 714 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 HSPBP1Q9NZL4 362 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CACNG4Q9UBN1 327 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 L1RE1Q9UN81 338 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GPR55Q9Y2T6 319 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 LAMA3Q16787 3333 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 LTBP2Q14767 1821 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms