RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 P2RY11Q96G91 374 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 RBBP8Q99708 897 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 C16orf70Q9BSU1 422 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 APOL6Q9BWW8 343 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 PDGFCQ9NRA1 345 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 SYBUQ9NX95 663 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 GDAP2Q9NXN4 497 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 SLC17A6Q9P2U8 582 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 SSX2IPQ9Y2D8 614 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 MFHAS1Q9Y4C4 1052 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 RAD54BQ9Y620 910 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 MEI4A8MW99 385 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 SMIM24O75264 130 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 UPP2O95045 317 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 GARSP41250 739 aaKnown RBP6.84□□□□□ -1.31
CDH12-203ENST00000517378 SERPINB8P50452 374 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 PAPOLAP51003 745 aaKnown RBP6.84□□□□□ -1.31
CDH12-203ENST00000517378 HK2P52789 917 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 LIMK2P53671 638 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 IGBP1P78318 339 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 PDK1Q15118 436 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 MARCH8Q5T0T0 291 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 RNF220Q5VTB9 566 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 METTL21CQ5VZV1 264 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 C9orf57Q5W0N0 161 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 PDPK2PQ6A1A2 396 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 TAPT1Q6NXT6 567 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 RNF111Q6ZNA4 994 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 RASSF3Q86WH2 238 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 GSTCDQ8NEC7 633 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 BEST2Q8NFU1 509 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 SPDYE1Q8NFV5 336 aaPredicted RBP6.84□□□□□ -1.31
CDH12-203ENST00000517378 NLRP7Q8WX94 980 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 TSPAN18Q96SJ8 248 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 LGMNQ99538 433 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 SH3GL3Q99963 347 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 GORASP1Q9BQQ3 440 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 MAGEB5Q9BZ81 275 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 VCX3BQ9H321 246 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 DPEP3Q9H4B8 488 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 PAPOLBQ9NRJ5 636 aaKnown RBP6.84□□□□□ -1.31
CDH12-203ENST00000517378 TUBGCP4Q9UGJ1 667 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 CDH22Q9UJ99 828 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 ENO4A6NNW6 628 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 PIRO00625 290 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 XPO1O14980 1071 aaKnown RBP6.83□□□□□ -1.32
CDH12-203ENST00000517378 PEX1O43933 1283 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 POLBP06746 335 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 RALBP11234 206 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 PSMB4P28070 264 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 HOXA11P31270 313 aaPredicted RBP6.83□□□□□ -1.32
CDH12-203ENST00000517378 AIF1P55008 147 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 SLC25A3Q00325 362 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 GRM2Q14416 872 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 PCBP1Q15365 356 aaKnown RBP eCLIP6.83□□□□□ -1.32
CDH12-203ENST00000517378 Q3C1V9 767 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 CWF19L1Q69YN2 538 aaKnown RBP6.83□□□□□ -1.32
CDH12-203ENST00000517378 SLC27A1Q6PCB7 646 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 EPGNQ6UW88 154 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 RAPH1Q70E73 1250 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 ARMCX2Q7L311 632 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 TMEM135Q86UB9 458 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 ERO1BQ86YB8 467 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 ZNF567Q8N184 647 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 PYROXD2Q8N2H3 581 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 RNF139Q8WU17 664 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 NCSTNQ92542 709 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 SLC2A13Q96QE2 648 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 FERMT1Q9BQL6 677 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 CXCL16Q9H2A7 254 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 VTA1Q9NP79 307 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 SNX15Q9NRS6 342 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 TMEM216Q9P0N5 145 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 CDY2AQ9Y6F7 541 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 CDY1Q9Y6F8 540 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.83□□□□□ -1.32
CDH12-203ENST00000517378 EME2A4GXA9 379 aaPredicted RBP6.83□□□□□ -1.32
CDH12-203ENST00000517378 G3V2L1 256 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 DCLK1O15075 740 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 SLC22A2O15244 555 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 USP1O94782 785 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 MPOP05164 745 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 GNAT1P11488 350 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 CPA3P15088 417 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 ITGAXP20702 1163 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 CRADDP78560 199 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 KCTD11Q693B1 232 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 CASC4Q6P4E1 433 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 RFX8Q6ZV50 586 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 ARHGAP18Q8N392 663 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 NME8Q8N427 588 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 OR6B3Q8NGW1 331 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 CNDP1Q96KN2 507 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 NPY6RQ99463 290 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 RTKNQ9BST9 563 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 CDH19Q9H159 772 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 ADAMTS10Q9H324 1103 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 CASS4Q9NQ75 786 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 PNPOQ9NVS9 261 aa6.83□□□□□ -1.32
CDH12-203ENST00000517378 GJD2Q9UKL4 321 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms