RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 ARHGAP8P85298 464 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 B4GALNT1Q00973 533 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ROR1Q01973 937 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TMEM115Q12893 351 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 LRMPQ12912 555 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CDC16Q13042 620 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 STK4Q13043 487 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CRHR2Q13324 411 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 DNASE1L3Q13609 305 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PLCB4Q15147 1175 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RASA2Q15283 850 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 SF3B3Q15393 1217 aaKnown RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 AP5B1Q2VPB7 878 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 SPDYE7PQ495Y7 208 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ZNF667Q5HYK9 610 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TCERG1LQ5VWI1 586 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ZKSCAN2Q63HK3 967 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NAPEPLDQ6IQ20 393 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RPUSD3Q6P087 351 aaKnown RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NBPF11Q86T75 865 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 SCN4BQ8IWT1 228 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TAGAPQ8N103 731 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PLD5Q8N7P1 536 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 FRMD1Q8N878 549 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 BEND2Q8NDZ0 799 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TOR1AIP2Q8NFQ8 470 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TNIP2Q8NFZ5 429 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 OR52L2PQ8NGH6 319 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 SSH3Q8TE77 659 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 GLMPQ8WWB7 406 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 FKBP10Q96AY3 582 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 KLHL29Q96CT2 875 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RSPRY1Q96DX4 576 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 BOD1Q96IK1 185 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 BAG1Q99933 345 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ADAM2Q99965 735 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 HTATIP2Q9BUP3 242 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 EPHX3Q9H6B9 360 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 USP29Q9HBJ7 922 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 AKIP1Q9NQ31 210 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 HCN3Q9P1Z3 774 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 MGAT4CQ9UBM8 478 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 HDAC6Q9UBN7 1215 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CFDP1Q9UEE9 299 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 LIMA1Q9UHB6 759 aaKnown RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CHORDC1Q9UHD1 332 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CCNL1Q9UK58 526 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ZNF711Q9Y462 761 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 KCNE2Q9Y6J6 123 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RUSC2Q8N2Y8 1516 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ADGRA2Q96PE1 1338 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CYP3A7-CYP3A51PA0A087WV96 503 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 PABPN1LA6NDY0 278 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 UNC119BA6NIH7 251 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 LIPT2A6NK58 231 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 C3orf70A6NLC5 250 aaPredicted RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 VWC2LB2RUY7 222 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SNAP23O00161 211 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 MASP2O00187 686 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 FAM20BO75063 409 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CDKL5O76039 1030 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 NDUFA10O95299 355 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 MBPP02686 304 aaPredicted RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 VDRP11473 427 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 COX7A2P14406 83 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ACO1P21399 889 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 COMTP21964 271 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CYP3A7P24462 503 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ITPKBP27987 946 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CTGFP29279 349 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GCH1P30793 250 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 HIBADHP31937 336 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 PPARGP37231 505 aaPredicted RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 NNMTP40261 264 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 TPTEP56180 551 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SUMO2P61956 95 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 RPL7AP62424 266 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 TXNL4AP83876 142 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 EFNB1P98172 346 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 PSG6Q00889 435 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CALD1Q05682 793 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ITIH3Q06033 890 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CCDC15Q0P6D6 951 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GAB1Q13480 694 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 ALKBH1Q13686 389 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 BYSLQ13895 437 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 RRP1BQ14684 758 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 PSMD6Q15008 389 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 GXYLT1Q4G148 440 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 TTI2Q6NXR4 508 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 MTFR2Q6P444 385 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 Q6ZSN1 163 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 RNF144BQ7Z419 303 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 LIMS2Q7Z4I7 341 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 CPEB3Q8NE35 698 aaKnown RBP3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SCFD2Q8WU76 684 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 SAAL1Q96ER3 474 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 FEM1CQ96JP0 617 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 KLHL15Q96M94 604 aa3.52□□□□□ -1.85
SCARNA15.2-201ENST00000516409 C5orf34Q96MH7 638 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms