RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 ZNF646O15015 1829 aaPredicted RBP0.72□□□□□ -2.29
SCARNA23-201ENST00000516060 COL16A1Q07092 1604 aaPredicted RBP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 A0A0J9YWU9 116 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 KLLNB2CW77 178 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 NPIPB11E5RHQ5 1161 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 SORBS2O94875 1100 aaKnown RBP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 ATP1A1P05023 1023 aaKnown RBP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 THP07101 528 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 PARP1P09874 1014 aaKnown RBP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 MARK3P27448 753 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 DUSP1P28562 367 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 CLK1P49759 484 aaKnown RBP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 PGDP52209 483 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 MLLT10P55197 1068 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 EIF4A1P60842 406 aaKnown RBP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 DMWDQ09019 674 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 SREBF2Q12772 1141 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 MYBPHQ13203 477 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 ANXA2RQ3ZCQ2 193 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 THEMIS2Q5TEJ8 643 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 SOGA3Q5TF21 947 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 C15orf39Q6ZRI6 1047 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 USP49Q70CQ1 688 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 HOMER1Q86YM7 354 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 CELF5Q8N6W0 485 aaKnown RBP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 DDX51Q8N8A6 666 aaKnown RBP eCLIP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 KDM1BQ8NB78 822 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 RAPGEF4Q8WZA2 1011 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 AKAP1Q92667 903 aaKnown RBP eCLIP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 KAT2AQ92830 837 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 FAM167AQ96KS9 214 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 MS4A7Q9GZW8 240 aaPredicted RBP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 PDZD7Q9H5P4 517 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 IL21RQ9HBE5 538 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 FBRSL1Q9HCM7 1045 aaKnown RBP0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 ZSCAN32Q9NX65 697 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 COL20A1Q9P218 1284 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 IL36RNQ9UBH0 155 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 STEAP1Q9UHE8 339 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 VPS4AQ9UN37 437 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 PCDHA6Q9UN73 950 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 PLAAQ9Y263 795 aa0.71□□□□□ -2.3
SCARNA23-201ENST00000516060 IGHV4OR15-8A0A075B7B6 117 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 TTC34A8MYJ7 566 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 FAM227AF5H4B4 570 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 K7ESF4 209 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 EYA2O00167 538 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 RGS10O43665 173 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 SERPINI2O75830 405 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 RASAL1O95294 804 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 MYCLP1P12525 358 aaPredicted RBP0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 GNLYP22749 145 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 HLCSP50747 726 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 CLCN3P51790 818 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 SLC8A3P57103 927 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 MRPS5P82675 430 aaKnown RBP0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 TMPRSS15P98073 1019 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 RIGQ13278 110 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 KLF1Q13351 362 aaPredicted RBP0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 PLS1Q14651 629 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 STAT4Q14765 748 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 ACAP2Q15057 778 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 UAP1L1Q3KQV9 507 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 ZNF876PQ49A33 203 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 TCTEX1D4Q5JR98 221 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 KHDC1LQ5JSQ8 128 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 ENTPD8Q5MY95 495 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 ZNF343Q6P1L6 599 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 NOTCH2NLQ7Z3S9 236 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 KCTD20Q7Z5Y7 419 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 ADGRA1Q86SQ6 560 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 DDX42Q86XP3 938 aaKnown RBP eCLIP0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 CBARPQ8N350 705 aaPredicted RBP0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 PMFBP1Q8TBY8 1022 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 XPNPEP3Q9NQH7 507 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 ABCB10Q9NRK6 738 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 CPA4Q9UI42 421 aa0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 AGO1Q9UL18 857 aaKnown RBP0.7□□□□□ -2.3
SCARNA23-201ENST00000516060 ATRXP46100 2492 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 LDB2O43679 373 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 FTLP02792 175 aaPredicted RBP0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 ALDH2P05091 517 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 TUBBP07437 444 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 SLC3A2P08195 630 aaKnown RBP0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 NAGAP17050 411 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 STAT6P42226 847 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 MAP2K6P52564 334 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 TUBB4BP68371 445 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 NKX6-1P78426 367 aaPredicted RBP0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 TBX2Q13207 712 aaPredicted RBP0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 ZNF284Q2VY69 593 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 GLE1Q53GS7 698 aaKnown RBP0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 EFHC1Q5JVL4 640 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 KYAT3Q6YP21 454 aaKnown RBP0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 Q7L0L9 218 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 CYB5R4Q7L1T6 521 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 CAMK1DQ8IU85 385 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 ERC1Q8IUD2 1116 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 P3H2Q8IVL5 708 aa0.69□□□□□ -2.3
SCARNA23-201ENST00000516060 FGFRL1Q8N441 504 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms