RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 DNAAF2Q9NVR5 837 aaKnown RBP18.1■□□□□ 0.49
DDX41-217ENST00000515562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDX41-217ENST00000515562 XPO7Q9UIA9 1087 aaKnown RBP18.1■□□□□ 0.49
DDX41-217ENST00000515562 DNAJC12Q9UKB3 198 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 KCNU1A8MYU2 1149 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 F5H5T6 163 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 H0Y626 953 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 ABCB4P21439 1286 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 TACR2P21452 398 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 MAOBP27338 520 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 CCR1P32246 355 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 BPIFB4P59827 614 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 SLC14A1Q13336 389 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 EIF4EBP2Q13542 120 aaPredicted RBP18.09■□□□□ 0.49
DDX41-217ENST00000515562 TAF5Q15542 800 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 CT47A1Q5JQC4 288 aaPredicted RBP18.09■□□□□ 0.49
DDX41-217ENST00000515562 PITRM1Q5JRX3 1037 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 TTC39BQ5VTQ0 682 aaPredicted RBP18.09■□□□□ 0.49
DDX41-217ENST00000515562 RAP1GAP2Q684P5 730 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 C11orf57Q6ZUT1 292 aaPredicted RBP18.09■□□□□ 0.49
DDX41-217ENST00000515562 PIP4P1Q86T03 277 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 FAM124AQ86V42 546 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 CFAP52Q8N1V2 620 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 ZCCHC9Q8N567 271 aaKnown RBP18.09■□□□□ 0.49
DDX41-217ENST00000515562 WDTC1Q8N5D0 677 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 C1orf131Q8NDD1 294 aaKnown RBP18.09■□□□□ 0.49
DDX41-217ENST00000515562 MIR1-1HGQ9H1L0 117 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 SYNCQ9H7C4 482 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 DDIT4Q9NX09 232 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 KIAA1522Q9P206 1035 aaPredicted RBP18.09■□□□□ 0.49
DDX41-217ENST00000515562 AJAP1Q9UKB5 411 aaPredicted RBP18.09■□□□□ 0.49
DDX41-217ENST00000515562 SCML1Q9UN30 329 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 CACNA1EQ15878 2313 aa18.09■□□□□ 0.49
DDX41-217ENST00000515562 BCAT2O15382 392 aaPredicted RBP18.08■□□□□ 0.48
DDX41-217ENST00000515562 SRPRAP08240 638 aaKnown RBP18.08■□□□□ 0.48
DDX41-217ENST00000515562 ANP32AP39687 249 aaKnown RBP18.08■□□□□ 0.48
DDX41-217ENST00000515562 RPS14P62263 151 aaKnown RBP18.08■□□□□ 0.48
DDX41-217ENST00000515562 PITX1P78337 314 aaPredicted RBP18.08■□□□□ 0.48
DDX41-217ENST00000515562 GRIK2Q13002 908 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 ARID5BQ14865 1188 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 HNRNPA1L2Q32P51 320 aaKnown RBP18.08■□□□□ 0.48
DDX41-217ENST00000515562 FSCBQ5H9T9 825 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 MIIPQ5JXC2 388 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 RABGAP1LQ5R372 815 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 OLFML1Q6UWY5 402 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 FAM183BPQ6ZVS7 135 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 SLC47A2Q86VL8 602 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 ZDHHC17Q8IUH5 632 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 FAM71AQ8IYT1 594 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 DEFB106AQ8N104 65 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 MYO19Q96H55 970 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 BTBD1Q9H0C5 482 aa18.08■□□□□ 0.48
DDX41-217ENST00000515562 RSPH9Q9H1X1 276 aaPredicted RBP18.08■□□□□ 0.48
DDX41-217ENST00000515562 INTS6Q9UL03 887 aaKnown RBP18.08■□□□□ 0.48
DDX41-217ENST00000515562 FOXN3O00409 490 aaPredicted RBP18.07■□□□□ 0.48
DDX41-217ENST00000515562 RNASEH1O60930 286 aaKnown RBP18.07■□□□□ 0.48
DDX41-217ENST00000515562 DAB1O75553 588 aa18.07■□□□□ 0.48
DDX41-217ENST00000515562 CLCN1P35523 988 aa18.07■□□□□ 0.48
DDX41-217ENST00000515562 SFSWAPQ12872 951 aaKnown RBP18.07■□□□□ 0.48
DDX41-217ENST00000515562 FOXC1Q12948 553 aa18.07■□□□□ 0.48
DDX41-217ENST00000515562 SLC12A1Q13621 1099 aa18.07■□□□□ 0.48
DDX41-217ENST00000515562 HNRNPDQ14103 355 aaKnown RBP18.07■□□□□ 0.48
DDX41-217ENST00000515562 PTPN20Q4JDL3 420 aa18.07■□□□□ 0.48
DDX41-217ENST00000515562 RNF219Q5W0B1 726 aaPredicted RBP18.07■□□□□ 0.48
DDX41-217ENST00000515562 OR6B2Q6IFH4 312 aa18.07■□□□□ 0.48
DDX41-217ENST00000515562 SLC26A9Q7LBE3 791 aa18.07■□□□□ 0.48
DDX41-217ENST00000515562 OR2I1PQ8NGU4 316 aa18.07■□□□□ 0.48
DDX41-217ENST00000515562 RNF34Q969K3 372 aa18.07■□□□□ 0.48
DDX41-217ENST00000515562 ERVW-1Q9UQF0 538 aa18.07■□□□□ 0.48
DDX41-217ENST00000515562 EPG5Q9HCE0 2579 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 ITIH6Q6UXX5 1313 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 SYNJ2BP-COX16A0A087WUM0 186 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 A0A1B0GVM2 712 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 TCAF2A6NFQ2 919 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 PES1O00541 588 aaKnown RBP18.06■□□□□ 0.48
DDX41-217ENST00000515562 GJB3O75712 270 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 SEMA4FO95754 770 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 ERBB2P04626 1255 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 PNMA6AP0CW24 399 aaPredicted RBP18.06■□□□□ 0.48
DDX41-217ENST00000515562 EEF1GP26641 437 aaKnown RBP18.06■□□□□ 0.48
DDX41-217ENST00000515562 ACSL1P33121 698 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 OXCT1P55809 520 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 ECT2LQ008S8 904 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 SLC6A3Q01959 620 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 RAPGEF1Q13905 1077 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 KCNJ12Q14500 433 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 ST3GAL2Q16842 350 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 HSP90AA4PQ58FG1 418 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 IL27RAQ6UWB1 636 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 MMS22LQ6ZRQ5 1243 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 CLEC17AQ6ZS10 378 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 USP30Q70CQ3 517 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 ZNF397Q8NF99 534 aaPredicted RBP18.06■□□□□ 0.48
DDX41-217ENST00000515562 SNX19Q92543 992 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 MRGPRX3Q96LB0 322 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 PRMT1Q99873 361 aaKnown RBP18.06■□□□□ 0.48
DDX41-217ENST00000515562 PDCL3Q9H2J4 239 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 SGK2Q9HBY8 427 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 RRN3Q9NYV6 651 aa18.06■□□□□ 0.48
DDX41-217ENST00000515562 COX16Q9P0S2 106 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms