RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 FAM204AQ9H8W3 233 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 HEYLQ9NQ87 328 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-211ENST00000514893 B3GNT3Q9Y2A9 372 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 PLSCR5A0PG75 271 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 RFPL1O75677 317 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 ALDH1L1O75891 902 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 U2AF1L5P0DN76 240 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-211ENST00000514893 MYF5P13349 255 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 TGM2P21980 687 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 DLX5P56178 289 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 U2AF1Q01081 240 aaKnown RBP eCLIP4.25□□□□□ -1.73
NEDD4-211ENST00000514893 GPS1Q13098 491 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 CBFBQ13951 182 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 TDRD12Q587J7 1177 aaKnown RBP4.25□□□□□ -1.73
NEDD4-211ENST00000514893 RNF220Q5VTB9 566 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 ABLIM2Q6H8Q1 611 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 DSTYKQ6XUX3 929 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.25□□□□□ -1.73
NEDD4-211ENST00000514893 KRT28Q7Z3Y7 464 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 CAMK1DQ8IU85 385 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 LRTOMTQ8WZ04 291 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 ZNF347Q96SE7 839 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 DDX31Q9H8H2 851 aaKnown RBP4.25□□□□□ -1.73
NEDD4-211ENST00000514893 TCF7L2Q9NQB0 619 aa4.25□□□□□ -1.73
NEDD4-211ENST00000514893 MAGED2Q9UNF1 606 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-211ENST00000514893 ZSCAN9O15535 394 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-211ENST00000514893 IGLV2-11P01706 119 aa4.24□□□□□ -1.73
NEDD4-211ENST00000514893 SERPINB2P05120 415 aa4.24□□□□□ -1.73
NEDD4-211ENST00000514893 SP1P08047 785 aa4.24□□□□□ -1.73
NEDD4-211ENST00000514893 PMPCAQ10713 525 aa4.24□□□□□ -1.73
NEDD4-211ENST00000514893 TRAF1Q13077 416 aa4.24□□□□□ -1.73
NEDD4-211ENST00000514893 POLD3Q15054 466 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-211ENST00000514893 ZRSR1Q15695 479 aaKnown RBP4.24□□□□□ -1.73
NEDD4-211ENST00000514893 FSCBQ5H9T9 825 aa4.24□□□□□ -1.73
NEDD4-211ENST00000514893 CLIP4Q8N3C7 705 aa4.24□□□□□ -1.73
NEDD4-211ENST00000514893 PAQR4Q8N4S7 273 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-211ENST00000514893 STRBPQ96SI9 672 aaKnown RBP4.24□□□□□ -1.73
NEDD4-211ENST00000514893 C1orf112Q9NSG2 853 aa4.24□□□□□ -1.73
NEDD4-211ENST00000514893 TYW1Q9NV66 732 aaKnown RBP4.24□□□□□ -1.73
NEDD4-211ENST00000514893 CADPSQ9ULU8 1353 aa4.24□□□□□ -1.73
NEDD4-211ENST00000514893 VWA5AO00534 786 aa4.23□□□□□ -1.73
NEDD4-211ENST00000514893 MGEA5O60502 916 aa4.23□□□□□ -1.73
NEDD4-211ENST00000514893 PPP6R2O75170 966 aa4.23□□□□□ -1.73
NEDD4-211ENST00000514893 SNRNP70P08621 437 aaKnown RBP4.23□□□□□ -1.73
NEDD4-211ENST00000514893 RPL17P18621 184 aaKnown RBP4.23□□□□□ -1.73
NEDD4-211ENST00000514893 SLC39A14Q15043 492 aa4.23□□□□□ -1.73
NEDD4-211ENST00000514893 FAXCQ5TGI0 409 aa4.23□□□□□ -1.73
NEDD4-211ENST00000514893 ADAMTS14Q8WXS8 1223 aa4.23□□□□□ -1.73
NEDD4-211ENST00000514893 RUNDC1Q96C34 613 aa4.23□□□□□ -1.73
NEDD4-211ENST00000514893 TNFSF13BQ9Y275 285 aa4.23□□□□□ -1.73
NEDD4-211ENST00000514893 MMP24Q9Y5R2 645 aa4.23□□□□□ -1.73
NEDD4-211ENST00000514893 PRR23AA6NEV1 266 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 THAP12O43422 761 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 ANXA2P07355 339 aaKnown RBP4.22□□□□□ -1.73
NEDD4-211ENST00000514893 ARP10275 920 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 ALADP13716 330 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 RFX5P48382 616 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-211ENST00000514893 PLCB4Q15147 1175 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 SF3B4Q15427 424 aaKnown RBP eCLIP4.22□□□□□ -1.73
NEDD4-211ENST00000514893 ALG10Q5BKT4 473 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 ALG10BQ5I7T1 473 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 C10orf76Q5T2E6 689 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 C8orf82Q6P1X6 216 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-211ENST00000514893 DARS2Q6PI48 645 aaKnown RBP4.22□□□□□ -1.73
NEDD4-211ENST00000514893 RFLNBQ8N5W9 214 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 ADPRHL1Q8NDY3 354 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 IGSF21Q96ID5 467 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 WDR77Q9BQA1 342 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-211ENST00000514893 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-211ENST00000514893 MAGEH1Q9H213 219 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 RNF146Q9NTX7 359 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 NOTCH3Q9UM47 2321 aa4.22□□□□□ -1.73
NEDD4-211ENST00000514893 MS4A18H0YCH9 400 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 GOLIM4O00461 696 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 BUB3O43684 328 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 CNTN5O94779 1100 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 F7P08709 466 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-211ENST00000514893 RAB27AP51159 221 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 MCL1Q07820 350 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 TTF1Q15361 905 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-211ENST00000514893 CCDC6Q16204 474 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 HLFQ16534 295 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 P3H1Q32P28 736 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 MRNIPQ6NTE8 343 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 ENGASEQ8NFI3 743 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 KAT2AQ92830 837 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 NUDT22Q9BRQ3 303 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 RTFDC1Q9BY42 306 aaPredicted RBP4.21□□□□□ -1.74
NEDD4-211ENST00000514893 SLC4A4Q9Y6R1 1079 aa4.21□□□□□ -1.74
NEDD4-211ENST00000514893 LIASO43766 372 aa4.2□□□□□ -1.74
NEDD4-211ENST00000514893 SLC5A2P31639 672 aa4.2□□□□□ -1.74
NEDD4-211ENST00000514893 SLC16A2P36021 539 aa4.2□□□□□ -1.74
NEDD4-211ENST00000514893 SELENOVP59797 346 aa4.2□□□□□ -1.74
NEDD4-211ENST00000514893 GALNT3Q14435 633 aa4.2□□□□□ -1.74
NEDD4-211ENST00000514893 ENTPD8Q5MY95 495 aa4.2□□□□□ -1.74
NEDD4-211ENST00000514893 ZNF449Q6P9G9 518 aa4.2□□□□□ -1.74
NEDD4-211ENST00000514893 KRT27Q7Z3Y8 459 aa4.2□□□□□ -1.74
NEDD4-211ENST00000514893 FAM217AQ8IXS0 508 aa4.2□□□□□ -1.74
NEDD4-211ENST00000514893 TCP11L2Q8N4U5 519 aa4.2□□□□□ -1.74
NEDD4-211ENST00000514893 SLC25A41Q8N5S1 370 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms