RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TMLHEQ9NVH6 421 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 MTMR4Q9NYA4 1195 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 GJD2Q9UKL4 321 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 BAG5Q9UL15 447 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 HNRNPRO43390 633 aaKnown RBP5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 CNTN5O94779 1100 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 AGR2O95994 175 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 ALDOCP09972 364 aaKnown RBP5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 SOX2P48431 317 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 MCM2P49736 904 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 CCR5P51681 352 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 NHLH1Q02575 133 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 SLC12A1Q13621 1099 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 PFKFB3Q16875 520 aaPredicted RBP5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 CERKLQ49MI3 558 aaPredicted RBP5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 FSIP1Q8NA03 581 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 C8orf58Q8NAV2 365 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 SEMA6DQ8NFY4 1073 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 HASPINQ8TF76 798 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 HTATIP2Q9BUP3 242 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 OSBPL5Q9H0X9 879 aaPredicted RBP5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 ARL8BQ9NVJ2 186 aa5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 RRP7AQ9Y3A4 280 aaKnown RBP5.74□□□□□ -1.49
HMGCS1-207ENST00000514610 EYA2O00167 538 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 LATS1O95835 1130 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 PCP4P48539 62 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 YPEL5P62699 121 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 CDK18Q07002 472 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 TMEM88Q6PEY1 159 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 ZNF474Q6S9Z5 364 aaPredicted RBP5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 RTL10Q7L3V2 364 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 RHPN2Q8IUC4 686 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 USP13Q92995 863 aaPredicted RBP5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 ATP2A3Q93084 1043 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 ZNF764Q96H86 408 aaPredicted RBP5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 C5orf34Q96MH7 638 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 FCRL5Q96RD9 977 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 EIF2AK1Q9BQI3 630 aaKnown RBP5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 ABHD14AQ9BUJ0 271 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 HDHD5Q9BXW7 423 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 CLPBQ9H078 707 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 TLR8Q9NR97 1041 aaKnown RBP5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 SLC22A11Q9NSA0 550 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 PDP2Q9P2J9 529 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 COX11Q9Y6N1 276 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 SPATA31A5Q5VU36 1347 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 SPATA31A7Q8IWB4 1347 aa5.73□□□□□ -1.49
HMGCS1-207ENST00000514610 NPIPB13A6NJU9 1138 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 NPIPB5A8MRT5 1133 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 NPIPB4C9JG80 1138 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 PRPH2P23942 346 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 AVPR2P30518 371 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 PNPLA4P41247 253 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 CTXN3Q4LDR2 81 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 ALFQ53S48 1182 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 MAP3K21Q5TCX8 1036 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 DHRS13Q6UX07 377 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 BBS12Q6ZW61 710 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 MDGA2Q7Z553 956 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 TMTC1Q8IUR5 882 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 MAP4K1Q92918 833 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 RBM17Q96I25 401 aaKnown RBP5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 MAELQ96JY0 434 aaKnown RBP5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 ZNF347Q96SE7 839 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 TRIM2Q9C040 744 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 SFXN1Q9H9B4 322 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 TMEM160Q9NX00 188 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 PGAP2Q9UHJ9 254 aa5.72□□□□□ -1.49
HMGCS1-207ENST00000514610 VWA3AA6NCI4 1184 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 SEPT4O43236 478 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 RBMXL2O75526 392 aaKnown RBP5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 PRKCGP05129 697 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 ENO1P06733 434 aaKnown RBP5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 ST6GAL1P15907 406 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 HOXA7P31268 230 aaPredicted RBP5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 UBE3AQ05086 875 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 ZNF813Q6ZN06 617 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 RBM44Q6ZP01 1051 aaKnown RBP5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 ADPRHL1Q8NDY3 354 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 IGFBPL1Q8WX77 278 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 ZG16BQ96DA0 208 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 REEP2Q9BRK0 252 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 NOD2Q9HC29 1040 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 PDGFCQ9NRA1 345 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 PI4KBQ9UBF8 816 aa5.71□□□□□ -1.5
HMGCS1-207ENST00000514610 PLAUP00749 431 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 TGM2P21980 687 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 TACR3P29371 465 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 CHRNDQ07001 517 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 MTA1Q13330 715 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 THOC5Q13769 683 aaKnown RBP5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 ANXA2RQ3ZCQ2 193 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 GLE1Q53GS7 698 aaKnown RBP5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 CEP78Q5JTW2 689 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 SCN4BQ8IWT1 228 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 C16orf71Q8IYS4 520 aaPredicted RBP5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 ENDOVQ8N8Q3 282 aaKnown RBP5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 IL17REQ8NFR9 667 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms