RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 DDIT4Q9NX09 232 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 TAS2R14Q9NYV8 317 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 FBXO10Q9UK96 956 aa8.62□□□□□ -1.03
CCL28-204ENST00000514421 ARIH1Q9Y4X5 557 aaPredicted RBP8.62□□□□□ -1.03
CCL28-204ENST00000514421 ZNF318Q5VUA4 2279 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 SYNJ2BP-COX16A0A087WUM0 186 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 GOLGA6L7A0A1B0GV03 622 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 FAM170AA1A519 330 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 TBC1D3BA6NDS4 549 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 SIGLEC16A6NMB1 481 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 KCNU1A8MYU2 1149 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 NEDD8-MDP1E9PL57 170 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 K7EQS6 105 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 GFRA2O00451 464 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 ZNF185O15231 689 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 LAMTOR5O43504 91 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 CACNG3O60359 315 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 TSPAN3O60637 253 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 ENDOD1O94919 500 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 KAT7O95251 611 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 PENKP01210 267 aaPredicted RBP8.61□□□□□ -1.03
CCL28-204ENST00000514421 FTLP02792 175 aaPredicted RBP8.61□□□□□ -1.03
CCL28-204ENST00000514421 CISD3P0C7P0 127 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 PDGFRAP16234 1089 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 ABCB4P21439 1286 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 MCM3P25205 808 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 CXCL12P48061 93 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 CXCR3P49682 368 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 GSCP56915 257 aaPredicted RBP8.61□□□□□ -1.03
CCL28-204ENST00000514421 PITX1P78337 314 aaPredicted RBP8.61□□□□□ -1.03
CCL28-204ENST00000514421 MTAPQ13126 283 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 NME3Q13232 169 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 PPP2R5DQ14738 602 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 GLE1Q53GS7 698 aaKnown RBP8.61□□□□□ -1.03
CCL28-204ENST00000514421 TEX35Q5T0J7 233 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 MPP7Q5T2T1 576 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 PIK3R6Q5UE93 754 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 FYB2Q5VWT5 728 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 NAIF1Q69YI7 327 aaPredicted RBP8.61□□□□□ -1.03
CCL28-204ENST00000514421 GRAMD4Q6IC98 578 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCL28-204ENST00000514421 C12orf40Q86WS4 652 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 C3orf20Q8ND61 904 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 SPATA4Q8NEY3 305 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 ACTRT1Q8TDG2 376 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 KCNV2Q8TDN2 545 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 RXFP2Q8WXD0 754 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 PGAP3Q96FM1 320 aaPredicted RBP8.61□□□□□ -1.03
CCL28-204ENST00000514421 BTN2A3PQ96KV6 586 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 SELENOOQ9BVL4 669 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 SLC2A11Q9BYW1 496 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 THAP2Q9H0W7 228 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 WDCPQ9H6R7 721 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 PLK2Q9NYY3 685 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 COX16Q9P0S2 106 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 UVRAGQ9P2Y5 699 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 NUP210Q8TEM1 1887 aaPredicted RBP8.61□□□□□ -1.03
CCL28-204ENST00000514421 MUC6Q6W4X9 2439 aa8.61□□□□□ -1.03
CCL28-204ENST00000514421 C2CD4BA6NLJ0 364 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 TMCO5BA8MYB1 307 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 CHURC1-FNTBB4DL54 471 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 BHMG1C9JSJ3 638 aaPredicted RBP8.6□□□□□ -1.03
CCL28-204ENST00000514421 TIMM44O43615 452 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 BUB1BO60566 1050 aaPredicted RBP8.6□□□□□ -1.03
CCL28-204ENST00000514421 RNF40O75150 1001 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 FTCDO95954 541 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 MOCS2O96007 188 aaPredicted RBP8.6□□□□□ -1.03
CCL28-204ENST00000514421 MYBL1P10243 752 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 TACR2P21452 398 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 TNFRSF8P28908 595 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 SDC4P31431 198 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 RFC1P35251 1148 aaPredicted RBP8.6□□□□□ -1.03
CCL28-204ENST00000514421 FLT3P36888 993 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 DGKGP49619 791 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 SULT1E1P49888 294 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 CCR3P51677 355 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 PTPN5P54829 565 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 MRPS21P82921 87 aaKnown RBP8.6□□□□□ -1.03
CCL28-204ENST00000514421 DEUP1Q05D60 604 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 GAS6Q14393 721 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 ANGPT1Q15389 498 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 RPS6KA1Q15418 735 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 FAM133BQ5BKY9 247 aaKnown RBP8.6□□□□□ -1.03
CCL28-204ENST00000514421 MS4A13Q5J8X5 152 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 ACBD5Q5T8D3 534 aaPredicted RBP8.6□□□□□ -1.03
CCL28-204ENST00000514421 DNAJC24Q6P3W2 148 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 RFWD3Q6PCD5 774 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 MON1BQ7L1V2 547 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 PHTF2Q8N3S3 785 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 EZH1Q92800 747 aaPredicted RBP8.6□□□□□ -1.03
CCL28-204ENST00000514421 BHMTQ93088 406 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 ARHGEF26Q96DR7 871 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 TRIM11Q96F44 468 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 C1orf74Q96LT6 269 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 TBCBQ99426 244 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 METTL5Q9NRN9 209 aaKnown RBP8.6□□□□□ -1.03
CCL28-204ENST00000514421 PARVAQ9NVD7 372 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 DNAJC17Q9NVM6 304 aaKnown RBP8.6□□□□□ -1.03
CCL28-204ENST00000514421 FBXO4Q9UKT5 387 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 SLC27A6Q9Y2P4 619 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms