RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TIMMDC1Q9NPL8 285 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 FBXO6Q9NRD1 293 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 SLC38A7Q9NVC3 462 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 DNMT3BQ9UBC3 853 aaKnown RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 SCN5AQ14524 2016 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 TCRBV7S3A2A0A539 114 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 ZNF487B1APH4 448 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 TISP43B9A030 160 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 E9PQ18 207 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 ACOT8O14734 319 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 CAPN9O14815 690 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 BIRC5O15392 142 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 TSPAN1O60635 241 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 IL18RAPO95256 599 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 CSF2RAP15509 400 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 GRM5P41594 1212 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 VAMP7P51809 220 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 GSTM4Q03013 218 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 FAXCQ5TGI0 409 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 MPZL3Q6UWV2 235 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 BNIPLQ7Z465 357 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 CARM1Q86X55 608 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 LRRC71Q8N4P6 559 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 CPSF7Q8N684 471 aaKnown RBP7.63□□□□□ -1.19
CLIP1-205ENST00000514271 MYCT1Q8N699 235 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 TMEM161BQ8NDZ6 487 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 TOP1MTQ969P6 601 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 UBXN10Q96LJ8 280 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 TMEM120AQ9BXJ8 343 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 TRIM31Q9BZY9 425 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 TMEM8AQ9HCN3 771 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 IRAK4Q9NWZ3 460 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 ZFP69BQ9UJL9 534 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 ENPP3O14638 875 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 HARSP12081 509 aaKnown RBP7.63□□□□□ -1.19
CLIP1-205ENST00000514271 LAG3P18627 525 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 GLDCP23378 1020 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 VCPP55072 806 aaKnown RBP7.63□□□□□ -1.19
CLIP1-205ENST00000514271 GDF10P55107 478 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 DSG1Q02413 1049 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 CREMQ03060 361 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 NIPAL4Q0D2K0 466 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 SPIDRQ14159 915 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 ODF2Q5BJF6 829 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 HAUS6Q7Z4H7 955 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 VPS36Q86VN1 386 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 KSR1Q8IVT5 923 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 SRRM1Q8IYB3 904 aaKnown RBP7.63□□□□□ -1.19
CLIP1-205ENST00000514271 NDUFAF2Q8N183 169 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 TMEM143Q96AN5 459 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 SGF29Q96ES7 293 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 RBM15Q96T37 977 aaKnown RBP eCLIP7.63□□□□□ -1.19
CLIP1-205ENST00000514271 OSMRQ99650 979 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 ETNK2Q9NVF9 386 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 ITGA11Q9UKX5 1188 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 PLLPQ9Y342 182 aa7.63□□□□□ -1.19
CLIP1-205ENST00000514271 CHD5Q8TDI0 1954 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 PLXNA3P51805 1871 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CLIC2O15247 247 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 FKBP6O75344 327 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 VTNP04004 478 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CD1EP15812 388 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ZNF26P17031 533 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CYP3A5P20815 502 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 MMP8P22894 467 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 SERPINB3P29508 390 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 GABRB2P47870 512 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 HARS2P49590 506 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 RASSF2P50749 326 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 IZUMO3Q5VZ72 239 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ZNF365Q70YC5 407 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 HS2ST1Q7LGA3 356 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 PHLDB2Q86SQ0 1253 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 DHDDSQ86SQ9 333 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CLEC14AQ86T13 490 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 HERC6Q8IVU3 1022 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 DBF4BQ8NFT6 615 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 TCP10LQ8TDR4 215 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CENPOQ9BU64 300 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 POPDC2Q9HBU9 364 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 FAIMQ9NVQ4 179 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 RABL2AQ9UBK7 228 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 DNPEPQ9ULA0 475 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 TBX20Q9UMR3 447 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 PTPRSQ13332 1948 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 FAM159BA6NKW6 160 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 INO80B-WBP1J3KQ70 363 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 K7ENM7 598 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ZBED1O96006 694 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 RALAP11233 206 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 FGF3P11487 239 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 VAV1P15498 845 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CDH2P19022 906 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ACVR2AP27037 513 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CCL23P55773 120 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 PEX3P56589 373 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 RPS3AP61247 264 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 SFSWAPQ12872 951 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 DLG1Q12959 904 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 MBTPS1Q14703 1052 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms