RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 SOX4Q06945 474 aaPredicted RBP12.91□□□□□ -0.34
SDHA-216ENST00000514027 TPSAB1Q15661 275 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 CHI3L2Q15782 390 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 TTC7BQ86TV6 843 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 NME8Q8N427 588 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 CCNYQ8ND76 341 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 TTC8Q8TAM2 541 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 CENPIQ92674 756 aaPredicted RBP12.91□□□□□ -0.34
SDHA-216ENST00000514027 CCDC28BQ9BUN5 200 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 BRD8Q9H0E9 1235 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 SPON1Q9HCB6 807 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 XAB2Q9HCS7 855 aaKnown RBP12.91□□□□□ -0.34
SDHA-216ENST00000514027 SAR1AQ9NR31 198 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 HSFX1Q9UBD0 423 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 MTO1Q9Y2Z2 717 aaKnown RBP12.91□□□□□ -0.34
SDHA-216ENST00000514027 PCDHA11Q9Y5I1 949 aa12.91□□□□□ -0.34
SDHA-216ENST00000514027 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 ZNF487B1APH4 448 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 PIRO00625 290 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 HUS1O60921 280 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 LMNAP02545 664 aaKnown RBP12.9□□□□□ -0.34
SDHA-216ENST00000514027 HNRNPCP07910 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
SDHA-216ENST00000514027 ETS2P15036 469 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 MAGEA3P43357 314 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 BST1Q10588 318 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 NME3Q13232 169 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 KPNB1Q14974 876 aaKnown RBP12.9□□□□□ -0.34
SDHA-216ENST00000514027 ALKAL1Q6UXT8 129 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 ZNF554Q86TJ5 538 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 ALYREFQ86V81 257 aaKnown RBP12.9□□□□□ -0.34
SDHA-216ENST00000514027 PIGZQ86VD9 579 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 NUDCD3Q8IVD9 361 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
SDHA-216ENST00000514027 COLGALT1Q8NBJ5 622 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 NPLOC4Q8TAT6 608 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 E2F7Q96AV8 911 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 SKA1Q96BD8 255 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 MIPEPQ99797 713 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 DCLRE1BQ9H816 532 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 ZNF395Q9H8N7 513 aaPredicted RBP12.9□□□□□ -0.34
SDHA-216ENST00000514027 ARMCX1Q9P291 453 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 MYO18AQ92614 2054 aaKnown RBP12.9□□□□□ -0.34
SDHA-216ENST00000514027 A0A0J9YVX5 310 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 FAM159BA6NKW6 160 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 TGDSO95455 350 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 ALOX15P16050 662 aaPredicted RBP12.9□□□□□ -0.34
SDHA-216ENST00000514027 MATKP42679 507 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 SEMA5AQ13591 1074 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 GRB14Q14449 540 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 GSTA3Q16772 222 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 EFHC1Q5JVL4 640 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 SPDYAQ5MJ70 313 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 DUS1LQ6P1R4 473 aaKnown RBP12.9□□□□□ -0.34
SDHA-216ENST00000514027 ZCCHC23Q6ZST2 131 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 ARID3BQ8IVW6 561 aaPredicted RBP12.9□□□□□ -0.34
SDHA-216ENST00000514027 CRYBG2Q8N1P7 616 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 B3GALNT2Q8NCR0 500 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 BRI3BPQ8WY22 251 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 MTBPQ96DY7 904 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 OXNAD1Q96HP4 312 aaPredicted RBP12.9□□□□□ -0.34
SDHA-216ENST00000514027 CENPKQ9BS16 269 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 ARHGEF4Q9NR80 690 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 FZD10Q9ULW2 581 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 NRCAMQ92823 1304 aa12.9□□□□□ -0.34
SDHA-216ENST00000514027 DNAH12Q6ZR08 3092 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 A0A0A0MRY4 1105 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 RNF103O00237 685 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 XPOTO43592 962 aaKnown RBP12.89□□□□□ -0.35
SDHA-216ENST00000514027 CCDC22O60826 627 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 ENTPD5O75356 428 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 SUPT3HO75486 399 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 HOXD8P13378 290 aaPredicted RBP12.89□□□□□ -0.35
SDHA-216ENST00000514027 RABGGTBP53611 331 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 OXCT1P55809 520 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 SESN3P58005 492 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 HPCAP84074 193 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 HIC1Q14526 733 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 SNX17Q15036 470 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 SLC25A52Q3SY17 297 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 SV2CQ496J9 727 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 LIN52Q52LA3 116 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 ATG16L1Q676U5 607 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 IQSEC1Q6DN90 963 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 RFWD3Q6PCD5 774 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 STRADAQ7RTN6 431 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 LRRC43Q8N309 656 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 RNF139Q8WU17 664 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 SCG3Q8WXD2 468 aaKnown RBP12.89□□□□□ -0.35
SDHA-216ENST00000514027 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 TNIP3Q96KP6 325 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 SPATA13Q96N96 652 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 MED10Q9BTT4 135 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 DENND2DQ9H6A0 471 aaPredicted RBP12.89□□□□□ -0.35
SDHA-216ENST00000514027 IL1RAPL1Q9NZN1 696 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 RPL26L1Q9UNX3 145 aaKnown RBP12.89□□□□□ -0.35
SDHA-216ENST00000514027 USP3Q9Y6I4 520 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 ZNF638Q14966 1978 aaKnown RBP12.89□□□□□ -0.35
SDHA-216ENST00000514027 CENPFP49454 3210 aa12.89□□□□□ -0.35
SDHA-216ENST00000514027 HMX2A2RU54 273 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms