RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 MANEALQ5VSG8 457 aa11.69□□□□□ -0.54
HTT-213ENST00000513806 RWDD4Q6NW29 188 aaKnown RBP11.69□□□□□ -0.54
HTT-213ENST00000513806 ANKS1BQ7Z6G8 1248 aa11.69□□□□□ -0.54
HTT-213ENST00000513806 LRRC57Q8N9N7 239 aa11.69□□□□□ -0.54
HTT-213ENST00000513806 HJURPQ8NCD3 748 aaPredicted RBP11.69□□□□□ -0.54
HTT-213ENST00000513806 RAPGEF5Q92565 580 aa11.69□□□□□ -0.54
HTT-213ENST00000513806 EZH1Q92800 747 aaPredicted RBP11.69□□□□□ -0.54
HTT-213ENST00000513806 DNASE1L2Q92874 299 aa11.69□□□□□ -0.54
HTT-213ENST00000513806 OTUB2Q96DC9 234 aa11.69□□□□□ -0.54
HTT-213ENST00000513806 ARHGEF3Q9NR81 526 aa11.69□□□□□ -0.54
HTT-213ENST00000513806 DNAJC17Q9NVM6 304 aaKnown RBP11.69□□□□□ -0.54
HTT-213ENST00000513806 FAM86C2PA6NEL3 165 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 HOXC11O43248 304 aaPredicted RBP11.68□□□□□ -0.54
HTT-213ENST00000513806 EGFP01133 1207 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 PENKP01210 267 aaPredicted RBP11.68□□□□□ -0.54
HTT-213ENST00000513806 CYBBP04839 570 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 CD70P32970 193 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 CDH6P55285 790 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 SEC13P55735 322 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 PFKPQ01813 784 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 SEMA3BQ13214 749 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 GEN1Q17RS7 908 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 FSTL4Q6MZW2 842 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 C11orf63Q6NUN7 778 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 AADACL2Q6P093 401 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 ETFBKMTQ8IXQ9 262 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 UBALD2Q8IYN6 164 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 CCAR2Q8N163 923 aaKnown RBP11.68□□□□□ -0.54
HTT-213ENST00000513806 PHTF2Q8N3S3 785 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 CCDC33Q8N5R6 958 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
HTT-213ENST00000513806 ERLEC1Q96DZ1 483 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 DDX50Q9BQ39 737 aaKnown RBP11.68□□□□□ -0.54
HTT-213ENST00000513806 OSBPL2Q9H1P3 480 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 PCDH18Q9HCL0 1135 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 RBM12Q9NTZ6 932 aaKnown RBP11.68□□□□□ -0.54
HTT-213ENST00000513806 ETNK2Q9NVF9 386 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 CWC15Q9P013 229 aaKnown RBP11.68□□□□□ -0.54
HTT-213ENST00000513806 MARK1Q9P0L2 795 aa11.68□□□□□ -0.54
HTT-213ENST00000513806 IGLV3-10A0A075B6K4 115 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 DRGXA6NNA5 263 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 H0Y626 953 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 EEF2KO00418 725 aaKnown RBP11.67□□□□□ -0.54
HTT-213ENST00000513806 STK25O00506 426 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 KRT86O43790 486 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 LUC7L3O95232 432 aaKnown RBP11.67□□□□□ -0.54
HTT-213ENST00000513806 KRT1P04264 644 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 CISD3P0C7P0 127 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 AMPD1P23109 780 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 TARSP26639 723 aaKnown RBP11.67□□□□□ -0.54
HTT-213ENST00000513806 MZF1P28698 734 aaPredicted RBP11.67□□□□□ -0.54
HTT-213ENST00000513806 HLA-FP30511 346 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 ARSEP51690 589 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 TPI1P60174 286 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 LMAN2Q12907 356 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 NR1H3Q13133 447 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 KRT81Q14533 505 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 HADHQ16836 314 aaKnown RBP11.67□□□□□ -0.54
HTT-213ENST00000513806 RABGAP1LQ5R372 815 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 FAM182AQ5T1J6 154 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 EMC10Q5UCC4 262 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 LRRC31Q6UY01 552 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 NT5DC3Q86UY8 548 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 MFN1Q8IWA4 741 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 TP53INP2Q8IXH6 220 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 KIAA1958Q8N8K9 716 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 KIAA1524Q8TCG1 905 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 SORCS1Q8WY21 1168 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 FAM3CQ92520 227 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 EDAQ92838 391 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 CD101Q93033 1021 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 TBC1D31Q96DN5 1066 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 C1orf74Q96LT6 269 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 TSGA10Q9BZW7 698 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 TBC1D17Q9HA65 648 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 TRPV5Q9NQA5 729 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 ARHGEF4Q9NR80 690 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 ABCB8Q9NUT2 735 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 POLR3BQ9NW08 1133 aaPredicted RBP11.67□□□□□ -0.54
HTT-213ENST00000513806 DNAI1Q9UI46 699 aa11.67□□□□□ -0.54
HTT-213ENST00000513806 MUC22E2RYF6 1773 aaPredicted RBP11.67□□□□□ -0.54
HTT-213ENST00000513806 PRRT4C9JH25 899 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 CACNG3O60359 315 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 MAP3K6O95382 1288 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 IL4RP24394 825 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 EPHB2P29323 1055 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 HOXC13P31276 330 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 CSKP41240 450 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 SLC1A1P43005 524 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 DGKGP49619 791 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 SIGLEC14Q08ET2 396 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 ZNF211Q13398 564 aaPredicted RBP11.66□□□□□ -0.54
HTT-213ENST00000513806 CDH18Q13634 790 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 DPYSL3Q14195 570 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 UBXN2BQ14CS0 331 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 DPYSL2Q16555 572 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 C5orf22Q49AR2 442 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 BOLA3Q53S33 107 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 TMEM215Q68D42 235 aa11.66□□□□□ -0.54
HTT-213ENST00000513806 GRAMD4Q6IC98 578 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms