RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PLD2O14939 933 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 DAPK3O43293 454 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 HOXA3O43365 443 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 ZC3H11AO75152 810 aaKnown RBP eCLIP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 GPR32O75388 356 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 ECI2O75521 394 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 RFPL2O75678 378 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 RFPL3O75679 317 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 AKAP3O75969 853 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 TRIM16O95361 564 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 IGLV2-14P01704 120 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 POU2F2P09086 479 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 HNRNPA1P09651 372 aaKnown RBP eCLIP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 HK1P19367 917 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 IBSPP21815 317 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 CD72P21854 359 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 SMARCA1P28370 1054 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 RDXP35241 583 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 RAB27AP51159 221 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 NLRP11P59045 1033 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 CREMQ03060 361 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 RNASELQ05823 741 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 SQSTM1Q13501 440 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 MTMR1Q13613 665 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 LPAL2Q16609 132 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 MCMDC2Q4G0Z9 681 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 FNDC3BQ53EP0 1204 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 TRIM61Q5EBN2 209 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 NOMO2Q5JPE7 1267 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 FAM209AQ5JX71 171 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 YOD1Q5VVQ6 348 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 DAB2IPQ5VWQ8 1189 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 FAM160B1Q5W0V3 765 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 SDE2Q6IQ49 451 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 ZC3H10Q96K80 434 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 EXOC2Q96KP1 924 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 MBOAT7Q96N66 472 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 SDF4Q9BRK5 362 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 SCNM1Q9BWG6 230 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 SLKQ9H2G2 1235 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 LMAN1LQ9HAT1 526 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 UBN1Q9NPG3 1134 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 AKIP1Q9NQ31 210 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 VPS45Q9NRW7 570 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 TBC1D13Q9NVG8 400 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 POLR3BQ9NW08 1133 aaPredicted RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 GDE1Q9NZC3 331 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 DDX19BQ9UMR2 479 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 UBIAD1Q9Y5Z9 338 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 MEIS2O14770 477 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 ZNF213O14771 459 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 NRP1O14786 923 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 TEX28O15482 410 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 PROP1O75360 226 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 OFD1O75665 1012 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 EPN2O95208 641 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 PRLP01236 227 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 URODP06132 367 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 F5P12259 2224 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 DARSP14868 501 aaKnown RBP4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 HOXA9P31269 272 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 PTH2RP49190 550 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 FNTBP49356 437 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 GLUD2P49448 558 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 NOVA1P51513 510 aaKnown RBP4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 AK2P54819 239 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 ACTR2P61160 394 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 DSG1Q02413 1049 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 ROM1Q03395 351 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 AKAP13Q12802 2813 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 DGKKQ5KSL6 1271 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 VPS53Q5VIR6 699 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 PDXDC1Q6P996 788 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 ABHD15Q6UXT9 468 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 TPRG1Q6ZUI0 275 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 DOK3Q7L591 496 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 CACNA2D4Q7Z3S7 1137 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 GDF7Q7Z4P5 450 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 GRASPQ7Z6J2 395 aaPredicted RBP4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 TMEM173Q86WV6 379 aaPredicted RBP4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 ZNF280BQ86YH2 543 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 PLXDC1Q8IUK5 500 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 RNF168Q8IYW5 571 aaPredicted RBP4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 ENAHQ8N8S7 591 aaPredicted RBP4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 RNF169Q8NCN4 708 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 LSM14AQ8ND56 463 aaKnown RBP4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 DMXL2Q8TDJ6 3036 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 TRAPPC12Q8WVT3 735 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 FGF13Q92913 245 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 ELSPBP1Q96BH3 223 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 ZBTB10Q96DT7 871 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 MSANTD3Q96H12 275 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 PIGSQ96S52 555 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 MAP7D2Q96T17 732 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 MAP3K14Q99558 947 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 VN1R3Q9BXE9 311 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 KRT23Q9C075 422 aa4.08□□□□□ -1.76
PDLIM5-218ENST00000513341 ARRDC1-AS1Q9H2J1 176 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms