RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FAM124BQ9H5Z6 455 aaPredicted RBP7.55□□□□□ -1.2
USP46-208ENST00000512656 CLIC5Q9NZA1 410 aa7.55□□□□□ -1.2
USP46-208ENST00000512656 TMEM63CQ9P1W3 806 aa7.55□□□□□ -1.2
USP46-208ENST00000512656 HMGXB4Q9UGU5 601 aa7.55□□□□□ -1.2
USP46-208ENST00000512656 SALL4Q9UJQ4 1053 aa7.55□□□□□ -1.2
USP46-208ENST00000512656 ATP6V1DQ9Y5K8 247 aa7.55□□□□□ -1.2
USP46-208ENST00000512656 CFAP47Q6ZTR5 3102 aa7.55□□□□□ -1.2
USP46-208ENST00000512656 AKAP13Q12802 2813 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 CACNA1EQ15878 2313 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 EML5Q05BV3 1969 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 A0A1W2PQH9 124 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 ANTXRLA6NF34 631 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 PATE3B3GLJ2 98 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 GFRA2O00451 464 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 CDX4O14627 284 aaPredicted RBP7.54□□□□□ -1.2
USP46-208ENST00000512656 CYP26A1O43174 497 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 CILPO75339 1184 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 KRT37O76014 449 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 BEST1O76090 585 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 CFIP05156 583 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 GLB1P16278 677 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 CD58P19256 250 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 MZF1P28698 734 aaPredicted RBP7.54□□□□□ -1.2
USP46-208ENST00000512656 RDXP35241 583 aaKnown RBP7.54□□□□□ -1.2
USP46-208ENST00000512656 CHKAP35790 457 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 PTGER3P43115 390 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 KIF11P52732 1056 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 RPL6Q02878 288 aaKnown RBP7.54□□□□□ -1.2
USP46-208ENST00000512656 GFPT1Q06210 699 aaPredicted RBP7.54□□□□□ -1.2
USP46-208ENST00000512656 ZNF252P-AS1Q0IIN9 211 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 ADAM9Q13443 819 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 UAP1L1Q3KQV9 507 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 C1orf220Q5T0J3 134 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 KRT39Q6A163 491 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 SPOPLQ6IQ16 392 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 ALKBH2Q6NS38 261 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 SLC23A3Q6PIS1 610 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 TPGS1Q6ZTW0 290 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 ARMCX6Q7L4S7 300 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 CCDC186Q7Z3E2 898 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 HDDC3Q8N4P3 179 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 JAKMIP2Q96AA8 810 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 ELMO3Q96BJ8 720 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 DUSP16Q9BY84 665 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 UBXN6Q9BZV1 441 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 LACRTQ9GZZ8 138 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 TMEM8AQ9HCN3 771 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.54□□□□□ -1.2
USP46-208ENST00000512656 CALCOCO1Q9P1Z2 691 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 MBD1Q9UIS9 605 aaPredicted RBP7.54□□□□□ -1.2
USP46-208ENST00000512656 HPSEQ9Y251 543 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 RAXQ9Y2V3 346 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 ATRXP46100 2492 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 PKD1L2Q7Z442 2459 aa7.54□□□□□ -1.2
USP46-208ENST00000512656 THADAQ6YHU6 1953 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 KIAA1549LQ6ZVL6 1849 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 FAM237AA0A1B0GTK4 181 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 A0A1W2PQ27 194 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 A0A1W2PQ64 194 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 A0A1W2PQD8 194 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 A0A1W2PQF6 199 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 UPK3BL1B0FP48 263 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 HHLA1C9JL84 531 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 UPK3BL2E5RIL1 263 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 CETN3O15182 167 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 GREM1O60565 184 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 NDUFS2O75306 463 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 CYBBP04839 570 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 SYPP08247 313 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 SERPINF2P08697 491 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 TRIM49P0CI25 452 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 TRIM49CP0CI26 452 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 EPB41P11171 864 aaKnown RBP7.53□□□□□ -1.2
USP46-208ENST00000512656 ENGP17813 658 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 GABRG2P18507 467 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 ITPKAP23677 461 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 WASP42768 502 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 MAPK8P45983 427 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 PGFP49763 221 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 MXI1P50539 228 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 NDUFA8P51970 172 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 ZNF132P52740 706 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 PPP3CAQ08209 521 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 PKP1Q13835 747 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 STARD3Q14849 445 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 EDRF1Q3B7T1 1238 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 SYCP2LQ5T4T6 812 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 PEAR1Q5VY43 1037 aaPredicted RBP7.53□□□□□ -1.2
USP46-208ENST00000512656 EGFLAMQ63HQ2 1017 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 RSRC2Q7L4I2 434 aaKnown RBP7.53□□□□□ -1.2
USP46-208ENST00000512656 GPRIN1Q7Z2K8 1008 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 MIB1Q86YT6 1006 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 TAS1R2Q8TE23 839 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 IPO4Q8TEX9 1081 aaKnown RBP7.53□□□□□ -1.2
USP46-208ENST00000512656 UCMAQ8WVF2 138 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 WBP2Q969T9 261 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 HEXIM2Q96MH2 286 aaKnown RBP7.53□□□□□ -1.2
USP46-208ENST00000512656 TWNKQ96RR1 684 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 GABRG3Q99928 467 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 MMRN2Q9H8L6 949 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms