RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 THRSPQ92748 146 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 PEX13Q92968 403 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 HDAC10Q969S8 669 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 C3orf49Q96BT1 292 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 LRRC45Q96CN5 670 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 CNOT6LQ96LI5 555 aaKnown RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 FAM118BQ9BPY3 351 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 NTMT1Q9BV86 223 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 CARD6Q9BX69 1037 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 STN1Q9H668 368 aaKnown RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 SMURF2Q9HAU4 748 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 SCPEP1Q9HB40 452 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 SYTL2Q9HCH5 934 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 DDX4Q9NQI0 724 aaKnown RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 AGAP1Q9UPQ3 857 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 NUDCQ9Y266 331 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 E7EVH7 732 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 E9PBE3 544 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 H0Y8X5 98 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 POTEB2H3BUK9 544 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 MEIS1O00470 390 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 SCDO00767 359 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 SYN3O14994 580 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 CD3EAPO15446 510 aaKnown RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 SPOPO43791 374 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 TACC1O75410 805 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 NME6O75414 186 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 TGFAP01135 160 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 GLAP06280 429 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 TATP17735 454 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 CDC25BP30305 580 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 MFAP3P55082 362 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 HUNKP57058 714 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 YWHAZP63104 245 aaKnown RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 NOMO3P69849 1222 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 NUCB2P80303 420 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 MRPS9P82933 396 aaKnown RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 HYAL2Q12891 473 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 RPS6KA2Q15349 733 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 LETM2Q2VYF4 491 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 NOMO2Q5JPE7 1267 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZNF484Q5JVG2 852 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 FAM83HQ6ZRV2 1179 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 KIAA0408Q6ZU52 694 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 ADCK1Q86TW2 530 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 BBS5Q8N3I7 341 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 EFHD2Q96C19 240 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 NR1H4Q96RI1 486 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 MIPEPQ99797 713 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 PBX4Q9BYU1 374 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 PCDHAC1Q9H158 963 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 NELFAQ9H3P2 528 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 BICC1Q9H694 974 aaKnown RBP6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 SLC35C2Q9NQQ7 365 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 UCKL1Q9NWZ5 548 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 ANGPTL2Q9UKU9 493 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 KDM3AQ9Y4C1 1321 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 PIK3C2GO75747 1445 aa6.51□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZBTB42B2RXF5 422 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 RIMBP2O15034 1052 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 GMFGO60234 142 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 RANBP6O60518 1105 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 ETS1P14921 441 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 TTKP33981 857 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 NTF4P34130 210 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 AFF1P51825 1210 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 RARSP54136 660 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 VCPP55072 806 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 HAND2P61296 217 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 SQLEQ14534 574 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 SMTNL2Q2TAL5 461 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 XKR3Q5GH77 459 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 RAB41Q5JT25 222 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 ANKRD40Q6AI12 368 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 FCRLBQ6BAA4 426 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CHST9Q7L1S5 443 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 RHOT1Q8IXI2 618 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 OR14C36Q8NHC7 312 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 HDAC7Q8WUI4 952 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 ZNF516Q92618 1163 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 ELP4Q96EB1 424 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 FAM83CQ9BQN1 747 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 SRSF8Q9BRL6 282 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 FUZQ9BT04 418 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 TBCDQ9BTW9 1192 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 TRIM2Q9C040 744 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 GRIP2Q9C0E4 1043 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 FANCEQ9HB96 536 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 NGBQ9NPG2 151 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 TAS2R10Q9NYW0 307 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.5□□□□□ -1.376e-6■■□□□ 12.6
TRAPPC11-209ENST00000512476 COX16Q9P0S2 106 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CARD8Q9Y2G2 431 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 MYO5BQ9ULV0 1848 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 SCAF11Q99590 1463 aaKnown RBP6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 A0A1W2PNR3 127 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 MFSD2BA6NFX1 497 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 CLCA1A8K7I4 914 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 DNAJB6O75190 326 aa6.5□□□□□ -1.37
TRAPPC11-209ENST00000512476 DAB1O75553 588 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms