RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 SYPL2Q5VXT5 272 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 CARNMT1Q8N4J0 409 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 CHCHD4Q8N4Q1 142 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 KDM1BQ8NB78 822 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 ADAM32Q8TC27 787 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 ZNF606Q8WXB4 792 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 ZCCHC14Q8WYQ9 949 aaKnown RBP15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 BIRC7Q96CA5 298 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 MYEOVQ96EZ4 313 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 FAM81BQ96LP2 452 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 MED15Q96RN5 788 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 RSPH9Q9H1X1 276 aaPredicted RBP15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 POPDC2Q9HBU9 364 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 SGK2Q9HBY8 427 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 UBE2TQ9NPD8 197 aaPredicted RBP15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 OSGEPQ9NPF4 335 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 TM7SF3Q9NS93 570 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 PCOLCE2Q9UKZ9 415 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 INTS6Q9UL03 887 aaKnown RBP15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 SCML1Q9UN30 329 aa15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 FNDC3AQ9Y2H6 1198 aaKnown RBP15.24■□□□□ 0.03
CCHCR1-229ENST00000512418 A0A1B0GVT2 93 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 E5RJQ4 531 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 PAPSS1O43252 624 aaPredicted RBP15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 THAP12O43422 761 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 CBFA2T3O75081 653 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 GADD45BO75293 160 aaPredicted RBP15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 LUC7L3O95232 432 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 FTH1P19P0C7X4 201 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 GRIA4P48058 902 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 CSNK1EP49674 416 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 YWHAZP63104 245 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 ARID5BQ14865 1188 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 TEAD4Q15561 434 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 HNRNPA1L2Q32P51 320 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 DCAF6Q58WW2 860 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 TRIM65Q6PJ69 517 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 USP30Q70CQ3 517 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 GLRX5Q86SX6 157 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 TMEM110Q86TL2 294 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 BTN2A3PQ96KV6 586 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 TM9SF3Q9HD45 589 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 TJP2Q9UDY2 1190 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 CYTH4Q9UIA0 394 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 XPO7Q9UIA9 1087 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 SLCO1B1Q9Y6L6 691 aa15.23■□□□□ 0.03
CCHCR1-229ENST00000512418 FLRT2O43155 660 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 RNASEH1O60930 286 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 SIN3BO75182 1162 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 FSBPO95073 299 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 MOCS3O95396 460 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 TRUB2O95900 331 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 IGLV3-25P01717 112 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 SRPRAP08240 638 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 CD27P26842 260 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 SFSWAPQ12872 951 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 PDCLQ13371 301 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 FSCBQ5H9T9 825 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 PITRM1Q5JRX3 1037 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 RAP1GAP2Q684P5 730 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 MMS22LQ6ZRQ5 1243 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 CHSY1Q86X52 802 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 LGI2Q8N0V4 545 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 CFAP52Q8N1V2 620 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 SETD7Q8WTS6 366 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 ADAMTS14Q8WXS8 1223 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 MRGPRX3Q96LB0 322 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 PABPC3Q9H361 631 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 MTG2Q9H4K7 406 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 THAP9Q9H5L6 903 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 KIAA1522Q9P206 1035 aaPredicted RBP15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 RWDD2AQ9UIY3 292 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 APOBEC2Q9Y235 224 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 NCKAP1Q9Y2A7 1128 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 PCDHGB2Q9Y5G2 931 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 FREM2Q5SZK8 3169 aa15.22■□□□□ 0.03
CCHCR1-229ENST00000512418 ITIH6Q6UXX5 1313 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 TACR2P21452 398 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 CST6Q15828 149 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 KIF19Q2TAC6 998 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 ZC3H12AQ5D1E8 599 aaKnown RBP15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 DBX2Q6ZNG2 339 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 DHX40Q8IX18 779 aaKnown RBP15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 GANCQ8TET4 914 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 CRACR2AQ9BSW2 395 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 ACP6Q9NPH0 428 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 KIAA1468Q9P260 1216 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 APEX2Q9UBZ4 518 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 ERVW-1Q9UQF0 538 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 ANKRD6Q9Y2G4 727 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 CEP83Q9Y592 693 aa15.21■□□□□ 0.03
CCHCR1-229ENST00000512418 EDDM13A0A1B0GTR0 161 aa15.2■□□□□ 0.02
CCHCR1-229ENST00000512418 TARSL2A2RTX5 802 aaKnown RBP15.2■□□□□ 0.02
CCHCR1-229ENST00000512418 SRRM3A6NNA2 597 aaPredicted RBP15.2■□□□□ 0.02
CCHCR1-229ENST00000512418 BECN2A8MW95 431 aa15.2■□□□□ 0.02
CCHCR1-229ENST00000512418 F5H5T6 163 aa15.2■□□□□ 0.02
CCHCR1-229ENST00000512418 GLI1P08151 1106 aa15.2■□□□□ 0.02
CCHCR1-229ENST00000512418 USP8P40818 1118 aa15.2■□□□□ 0.02
CCHCR1-229ENST00000512418 ECT2LQ008S8 904 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms