RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PDX1P52945 283 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 ADPRHP54922 357 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 INHBCP55103 352 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 E2F5Q15329 346 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 CST6Q15828 149 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 SLC45A4Q5BKX6 768 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 KIAA0907Q7Z7F0 614 aaPredicted RBP9.52□□□□□ -0.88
NUP54-211ENST00000512151 VASH2Q86V25 355 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 DENND1CQ8IV53 801 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 KCTD17Q8N5Z5 321 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 IFI44Q8TCB0 444 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 DDI1Q8WTU0 396 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 GOLGA1Q92805 767 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 HPS3Q969F9 1004 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 JAKMIP2Q96AA8 810 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 ELMO3Q96BJ8 720 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 SMARCD1Q96GM5 515 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 CDK5RAP3Q96JB5 506 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 FGFBP2Q9BYJ0 223 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 ABCG4Q9H172 646 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 SMYD3Q9H7B4 428 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 ABCB8Q9NUT2 735 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 PLA2G4CQ9UP65 541 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.88
NUP54-211ENST00000512151 LRRK1Q38SD2 2015 aa9.52□□□□□ -0.89
NUP54-211ENST00000512151 KRT18P05783 430 aaKnown RBP9.51□□□□□ -0.89
NUP54-211ENST00000512151 DLDP09622 509 aaKnown RBP9.51□□□□□ -0.89
NUP54-211ENST00000512151 FAM163BP0C2L3 166 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 RNF224P0DH78 156 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 GARTP22102 1010 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 MAT2AP31153 395 aaKnown RBP9.51□□□□□ -0.89
NUP54-211ENST00000512151 SLC5A2P31639 672 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 ABCD1P33897 745 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 CASP5P51878 434 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 MAP3K7CLP57077 242 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 WDR72Q3MJ13 1102 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 POM121L1PQ3SYA9 428 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 L1TD1Q5T7N2 865 aaKnown RBP9.51□□□□□ -0.89
NUP54-211ENST00000512151 MBLAC2Q68D91 279 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 CRTC1Q6UUV9 634 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 TRAPPC11Q7Z392 1133 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 CBWD2Q8IUF1 395 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 MMAAQ8IVH4 418 aaKnown RBP9.51□□□□□ -0.89
NUP54-211ENST00000512151 FAM217AQ8IXS0 508 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 CPXM2Q8N436 756 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 ARL14Q8N4G2 192 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.51□□□□□ -0.89
NUP54-211ENST00000512151 OR14C36Q8NHC7 312 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 OMDQ99983 421 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 SDCBP2Q9H190 292 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 FBXO44Q9H4M3 255 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 CSNK1G1Q9HCP0 422 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 TBC1D7Q9P0N9 293 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 RASAL2Q9UJF2 1139 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 ZNF510Q9Y2H8 683 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 ATP8B3O60423 1300 aa9.51□□□□□ -0.89
NUP54-211ENST00000512151 RTN2O75298 545 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 PIAS2O75928 621 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 NEBLO76041 1014 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 LDHAP00338 332 aaKnown RBP9.5□□□□□ -0.89
NUP54-211ENST00000512151 CYBBP04839 570 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 ITGA2BP08514 1039 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 SLC8A1P32418 973 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 CD70P32970 193 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 SGSHP51688 502 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 METAP1P53582 386 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 TNNC1P63316 161 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 EFEMP1Q12805 493 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 DRAP1Q14919 205 aaPredicted RBP9.5□□□□□ -0.89
NUP54-211ENST00000512151 NCAPHQ15003 741 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 DUOXA2Q1HG44 320 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 FOXD4L6Q3SYB3 417 aaPredicted RBP9.5□□□□□ -0.89
NUP54-211ENST00000512151 C9orf64Q5T6V5 341 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 ZNF787Q6DD87 383 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 GUSBP11Q6P575 273 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 FOXD4L3Q6VB84 417 aaPredicted RBP9.5□□□□□ -0.89
NUP54-211ENST00000512151 ACOT1Q86TX2 421 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 IQCHQ86VS3 1027 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 WDR36Q8NI36 951 aaKnown RBP9.5□□□□□ -0.89
NUP54-211ENST00000512151 SLC2A14Q8TDB8 520 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 WFIKKN2Q8TEU8 576 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 RAD54LQ92698 747 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 ACCSQ96QU6 501 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 FAM129BQ96TA1 746 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 XYLT2Q9H1B5 865 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 NLGN3Q9NZ94 848 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 SUN2Q9UH99 717 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 CYTH4Q9UIA0 394 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 GGA2Q9UJY4 613 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 NAGPAQ9UK23 515 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 FZD4Q9ULV1 537 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 SCML1Q9UN30 329 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 R3HCC1Q9Y3T6 440 aaKnown RBP9.5□□□□□ -0.89
NUP54-211ENST00000512151 MED13Q9UHV7 2174 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 TBC1D3DA0A087WVF3 549 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 TBC1D3IA0A087WXS9 549 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 TBC1D3EA0A087X179 549 aa9.5□□□□□ -0.89
NUP54-211ENST00000512151 TBC1D3KA0A087X1G2 549 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms