RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 DEF6Q9H4E7 631 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 MRPL47Q9HD33 250 aaKnown RBP7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 ANLNQ9NQW6 1124 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 ABCB8Q9NUT2 735 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 C2orf42Q9NWW7 574 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 ZSCAN32Q9NX65 697 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 ELOVL2Q9NXB9 296 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 MYO1AQ9UBC5 1043 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 GGA2Q9UJY4 613 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 VANGL2Q9ULK5 521 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 HS3ST4Q9Y661 456 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 SCINQ9Y6U3 715 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 MYOFQ9NZM1 2061 aa7.39□□□□□ -1.23
PDLIM5-215ENST00000511586 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 CCDC163A0A0D9SF12 145 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 ANTXRLA6NF34 631 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 TMEM191CA6NGB0 347 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 I6L893 689 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 SGK1O00141 431 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 CCP110O43303 1012 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 ATMINO43313 823 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 AKR1B10O60218 316 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 ADAM23O75077 832 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 CLDN11O75508 207 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 RNF8O76064 485 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 LUC7L3O95232 432 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 APBB3O95704 486 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 ATP5BP06576 529 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 CHRM1P11229 460 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 PABPC1P11940 636 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 TDGF1P13385 188 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 HNRNPLP14866 589 aaKnown RBP eCLIP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 PSMA2P25787 234 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 MSNP26038 577 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 CD70P32970 193 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 DGKEP52429 567 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 OXCT1P55809 520 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 ZNF177Q13360 481 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 SLC12A1Q13621 1099 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 CRY1Q16526 586 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 ASTE1Q2TB18 679 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 C5orf22Q49AR2 442 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 HS1BP3Q53T59 392 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 EGFLAMQ63HQ2 1017 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 TMEM215Q68D42 235 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 SCYL2Q6P3W7 929 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 CHST9Q7L1S5 443 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 SLFN11Q7Z7L1 901 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 C14orf80Q86SX3 495 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 LONP2Q86WA8 852 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 CHPFQ8IZ52 775 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 AHI1Q8N157 1196 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 CCAR2Q8N163 923 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 ZBTB44Q8NCP5 570 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 WFDC5Q8TCV5 224 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 FNIP1Q8TF40 1166 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 NELL1Q92832 810 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 IGSF8Q969P0 613 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 LMLNQ96KR4 655 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 CHP1Q99653 195 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 NCAPGQ9BPX3 1015 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 THAP2Q9H0W7 228 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 OSBPL2Q9H1P3 480 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 NHEJ1Q9H9Q4 299 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 POLMQ9NP87 494 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 TMPRSS4Q9NRS4 437 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 FAM86C1Q9NVL1 165 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 POLR3BQ9NW08 1133 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 KIAA1522Q9P206 1035 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 OR12D3Q9UGF7 316 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 HCN2Q9UL51 889 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 PLA2G4CQ9UP65 541 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 PCDHGA2Q9Y5H1 932 aa7.38□□□□□ -1.23
PDLIM5-215ENST00000511586 IGLV3-10A0A075B6K4 115 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 DRGXA6NNA5 263 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 E9PAM4 449 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 ZBTB24O43167 697 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 SRGAP2O75044 1071 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 ALDH1A2O94788 518 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 MOCS3O95396 460 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 CYP1A2P05177 515 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 DLDP09622 509 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 HOXB2P14652 356 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 POLR2EP19388 210 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 CDC25BP30305 580 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 CNR2P34972 360 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 GGCXP38435 758 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 NBL1P41271 181 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 WASP42768 502 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 FNTBP49356 437 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 GALCP54803 685 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 AIF1P55008 147 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 CDH4P55283 916 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 OGDHQ02218 1023 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 NRG1Q02297 640 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 GFPT1Q06210 699 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 DMWDQ09019 674 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 LMAN2Q12907 356 aa7.37□□□□□ -1.23
PDLIM5-215ENST00000511586 ZNF234Q14588 700 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms