RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 C5orf22Q49AR2 442 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 HSF5Q4G112 596 aaPredicted RBP13.27□□□□□ -0.29
COL6A6-203ENST00000511332 CHST9Q7L1S5 443 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 TRMT11Q7Z4G4 463 aaKnown RBP13.27□□□□□ -0.29
COL6A6-203ENST00000511332 PSTKQ8IV42 348 aaKnown RBP13.27□□□□□ -0.29
COL6A6-203ENST00000511332 AHI1Q8N157 1196 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 CFAP52Q8N1V2 620 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 CARNMT1Q8N4J0 409 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL6A6-203ENST00000511332 KCNV2Q8TDN2 545 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 MYEOVQ96EZ4 313 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 P2RY11Q96G91 374 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 OSBPL2Q9H1P3 480 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 TMPRSS4Q9NRS4 437 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 RBM12Q9NTZ6 932 aaKnown RBP13.27□□□□□ -0.29
COL6A6-203ENST00000511332 PPARGC1AQ9UBK2 798 aaKnown RBP13.27□□□□□ -0.29
COL6A6-203ENST00000511332 OR12D3Q9UGF7 316 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 PCDHA13Q9Y5I0 950 aa13.27□□□□□ -0.29
COL6A6-203ENST00000511332 MYO18AQ92614 2054 aaKnown RBP13.27□□□□□ -0.29
COL6A6-203ENST00000511332 IGLV3-10A0A075B6K4 115 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 K7EQS6 105 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 ATG13O75143 517 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 MTA2O94776 668 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 CISD3P0C7P0 127 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 PABPC1P11940 636 aaKnown RBP13.26□□□□□ -0.29
COL6A6-203ENST00000511332 MIPP30301 263 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 HLA-FP30511 346 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 MAN1A1P33908 653 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 HTR7P34969 479 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 CDH4P55283 916 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 SEC13P55735 322 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 KRT83P78385 493 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 MRPS21P82921 87 aaKnown RBP13.26□□□□□ -0.29
COL6A6-203ENST00000511332 MESP2Q0VG99 397 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 CKAP5Q14008 2032 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 RAD9BQ6WBX8 426 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 Q6ZS52 159 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 ZNF683Q8IZ20 524 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 CCAR2Q8N163 923 aaKnown RBP13.26□□□□□ -0.29
COL6A6-203ENST00000511332 DTWD2Q8NBA8 298 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 FIBINQ8TAL6 211 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 SLC35G2Q8TBE7 412 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 UCMAQ8WVF2 138 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 EZH1Q92800 747 aaPredicted RBP13.26□□□□□ -0.29
COL6A6-203ENST00000511332 IGSF8Q969P0 613 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 TBC1D31Q96DN5 1066 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 PRRX2Q99811 253 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 EPAS1Q99814 870 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 ZYG11BQ9C0D3 744 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 RETREG1Q9H6L5 497 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 ABCB8Q9NUT2 735 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 GGA2Q9UJY4 613 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 FZD10Q9ULW2 581 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 USP18Q9UMW8 372 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 AP4E1Q9UPM8 1137 aa13.26□□□□□ -0.29
COL6A6-203ENST00000511332 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 A0A0A6YYK5 440 aaPredicted RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 CHURC1-FNTBB4DL54 471 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 NPC1O15118 1278 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 TRIM24O15164 1050 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 SRGAP2O75044 1071 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 PROSCO94903 275 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 MOCS3O95396 460 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 L1CAMP32004 1257 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 ARHGAP25P42331 645 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 CCR3P51677 355 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 ZNF135P52742 658 aaPredicted RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 ZNF177Q13360 481 aaPredicted RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 SLC12A1Q13621 1099 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 DMC1Q14565 340 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 TCEAL1Q15170 157 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 HADHQ16836 314 aaKnown RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 GEN1Q17RS7 908 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 ERMARDQ5T6L9 678 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 MANEALQ5VSG8 457 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 C14orf80Q86SX3 495 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 CIR1Q86X95 450 aaPredicted RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 SPEM1Q8N4L4 309 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 ZNF513Q8N8E2 541 aaPredicted RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 RPLP0P6Q8NHW5 317 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 WFDC5Q8TCV5 224 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 USP33Q8TEY7 942 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 BTBD6Q96KE9 485 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 CALR3Q96L12 384 aaKnown RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 PPP1R9BQ96SB3 815 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 SNRNP25Q9BV90 132 aaKnown RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 OSGEPQ9NPF4 335 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 SPATA6Q9NWH7 488 aaPredicted RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 KIAA1522Q9P206 1035 aaPredicted RBP13.25□□□□□ -0.29
COL6A6-203ENST00000511332 PCSK1NQ9UHG2 260 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 CLEC4EQ9ULY5 219 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 STARD13Q9Y3M8 1113 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 SNX10Q9Y5X0 201 aa13.25□□□□□ -0.29
COL6A6-203ENST00000511332 DRGXA6NNA5 263 aa13.24□□□□□ -0.29
COL6A6-203ENST00000511332 PRRT4C9JH25 899 aa13.24□□□□□ -0.29
COL6A6-203ENST00000511332 FGF10O15520 208 aaPredicted RBP13.24□□□□□ -0.29
COL6A6-203ENST00000511332 ARHGAP6O43182 974 aa13.24□□□□□ -0.29
COL6A6-203ENST00000511332 TIMM44O43615 452 aa13.24□□□□□ -0.29
COL6A6-203ENST00000511332 LRIG2O94898 1065 aa13.24□□□□□ -0.29
COL6A6-203ENST00000511332 CD70P32970 193 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms